PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2BG061400.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 230aa MW: 25974.2 Da PI: 9.2393 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 85.2 | 5.7e-27 | 96 | 145 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i+led+++yF+lpi++A+++L+++l++LK++CRq+GI+RWPhRk+ksl TRIDC2BG061400.6 96 ASITLEDIAQYFHLPIREASRTLKIGLSILKKKCRQHGIPRWPHRKLKSL 145 68**********************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 230 aa Download sequence |
GAFRSSSSAG SAPLLLYSSL AVLLCFCAPP LDPPLCCCTP PLLSSSAFVL LPWIRPSAAV 60 LLLDPKAMAN KDPSAVVANL LAPAEKQRRA HREYIASITL EDIAQYFHLP IREASRTLKI 120 GLSILKKKCR QHGIPRWPHR KLKSLDSLIH DLEFVIDDET ERDGVKQEDH MQDEKENQDA 180 IEALAKRKRM LETEKATIQQ KPTLDLMAET KQFRQYVFKR KYRAKTLVSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G35590.1 | 1e-37 | Nin-like family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2BG061400.6 |