![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2BG061400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 337aa MW: 38044.5 Da PI: 8.5683 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 84.4 | 1.1e-26 | 203 | 252 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i+led+++yF+lpi++A+++L+++l++LK++CRq+GI+RWPhRk+ksl TRIDC2BG061400.1 203 ASITLEDIAQYFHLPIREASRTLKIGLSILKKKCRQHGIPRWPHRKLKSL 252 68**********************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 337 aa Download sequence |
MEAPAAAAAA VSTLSALAVF VSTVDRGAVR SAHGYRVAGK GGGCGWERWV EREFAFTPTS 60 AREVPLAADA QRLLPADWRG RPVYREGQIA GPWRCILAFD FVAAVAPPPV PPPVLCPLRN 120 PRLMCVPSLY NDLTKVFQFQ KVEEKVPGLV QCDSDEKLTS SDAKDRVSVK QEAGSDTDER 180 PQFGEDLLAP AEKQRRAHRE YIASITLEDI AQYFHLPIRE ASRTLKIGLS ILKKKCRQHG 240 IPRWPHRKLK SLDSLIHDLE FVIDDETERD GVKQEDHMQD EKENQDAIEA LAKRKRMLET 300 EKATIQQKPT LDLMAETKQF RQYVFKRKYR AKTLVSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G35590.1 | 2e-49 | Nin-like family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2BG061400.1 |