PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG059510.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 429aa    MW: 46859.6 Da    PI: 8.0671
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG059510.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA44.42.2e-14741135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C +Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  TRIDC2BG059510.2  7 CCHCGVTSTPLWRNGPPHKPVLCNACGSRWRTKGS 41
                      99**************88888***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    
MGKEGPCCHC GVTSTPLWRN GPPHKPVLCN ACGSRWRTKG SLENYTPMHS RDDIDADQPR  60
VSKLKPPTLR LKEQRQLKKK PSHSIRENGA FSDQNFWKMG DADPSRSSSG SALSYSESCA  120
PYGSADASEM GSAQSHAWES LVPSKKRSCV TRTKSSSVDM LVKDLHCIMH EEQLSYLSGS  180
SEEDLIYHSA TPVGSFEIGY GSMLLRSSNS KSVEEDSEAN SVPADNKSYL TSESYSGTAS  240
FVVHSESKGA SNSNASPEKP KWFPVQTHEI AKRGKLHYSK QHTLENGEGT KETGGNENTS  300
ALKDLTKSTM KPLKRPHESQ LQSCPEGTMR IAKKVCKSVA MAPQFKSSFL PKSGGAPFNL  360
LMLPPDKISM LAPPQYMDNS DQDLLLEVPL NARQPEAELL CQPFQLSSVT RSSTSADVVA  420
DGEGRLKQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.33e-54GATA family protein