PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG058830.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | DBB | ||||||||
Protein Properties | Length: 265aa MW: 28006.2 Da PI: 6.1526 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 22.1 | 3.1e-07 | 4 | 46 | 5 | 41 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ +e + ++ fC ++ lC+ C H+ H++ + TRIDC2BG058830.4 4 QCDVCEAEAASVFCCADEAALCDACDRRVHRAnklagkHRRLS 46 7*****************************7688888888765 PP | |||||||
2 | zf-B_box | 26.3 | 1.6e-08 | 62 | 94 | 2 | 34 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeH 34 +++ C+ ++ek+ lfC++++ lC++C ++ H TRIDC2BG058830.4 62 KPPLCDICQEKRGFLFCKEDRAILCRECDVQVH 94 7899**************************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MKVQCDVCEA EAASVFCCAD EAALCDACDR RVHRANKLAG KHRRLSLLHP SPSSPSSSPS 60 SKPPLCDICQ EKRGFLFCKE DRAILCRECD VQVHTVSELT RRHGRFLLTG VRVSSAPAES 120 PAPSGQEEEE GNSTSPCNAD SCSGDASGTA SASATANDGS SISEYLTKTL PGWHVEDFLL 180 DDAAASAAVA VSSNKPYQQV GLARIGGPQE GYPAWAGQEQ LIGGVVVAAG ERASRELWVP 240 QMHAGAAWTG SKRPRPSSLG SSSYW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 252 | 256 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39070.1 | 7e-28 | DBB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG058830.4 |