PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG056380.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 289aa    MW: 30942.7 Da    PI: 7.5039
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG056380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.84.4e-171562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd+llvd+v+   +g+W+  ++  g++R++k+c++rw +yl
  TRIDC2BG056380.1 15 KGPWTPEEDKLLVDYVQANAPGNWRMLPKLAGLNRCGKSCRLRWTNYL 62
                      79********************************************97 PP
2Myb_DNA-binding538e-1768112147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg++T+eE++ ++++++  G++ W+ Ia+ ++ gRt++++k++w++ 
  TRIDC2BG056380.1  68 RGPFTPEEHKSILQLHAIVGNK-WSMIAAQLP-GRTDNEIKNYWNTN 112
                       89********************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MGRTPCCESR QGLKKGPWTP EEDKLLVDYV QANAPGNWRM LPKLAGLNRC GKSCRLRWTN  60
YLRPDIKRGP FTPEEHKSIL QLHAIVGNKW SMIAAQLPGR TDNEIKNYWN TNLKKQLRQA  120
ALVGEQHPAL ASPGASVGAG CLAARHTAQW ETARLEAEAR LSMLSTSAAT TSVTASSSSS  180
TAAAGGEHGA DAPSDVFLRL WNSEVGDTFR RKSAGSAPRE GSAPREGAQP AAAPLPPPGD  240
DSSAASNVTT AVTAEEYQVF LDMAAEELGL FHGGFSLYPP ADGLFAEFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.13e-77MYB family protein