PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG054220.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 938aa MW: 102112 Da PI: 6.1281

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG054220.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	88.4	5.9e-28	562	613	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i +++l+kyFs+++kdAAk+Lgvc+T+LKriCR +GI+RWP+Rki+++ TRIDC2BG054220.5 562 AEKNIGMDVLRKYFSGSLKDAAKSLGVCPTTLKRICRTHGISRWPSRKINKV 613 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 938 aa Download sequence
MDVPMPSQSN RAGCNGSVGS PSDDPYGVTA MMNFDGYSEL CGSPSLADQL FSLLNDSSTH 60 QMFAMWSSLG SSPRASGVSE DMQLDAYSSV PGDQKVDLVS SVNPAETGTG RMAKSSGDLG 120 SDGDPEQGST SLVPRPIAGN LLADRMLMAL SLFRKSLGGG VLAQVWMPVE QEGHVVLSTC 180 EQPFLLDQAL AGYREVSRHF VFSAKEETGL QPGLPGRVFI SGVPEWTSNV LYYSKPEYLR 240 MEYALHHDVR GSLAMPIYDP SKGSCCAVLE LITKKEKPDF AAEMDNLRHA LQAVNLETAK 300 DCIDQKVYSA NQKAAFTEIL DVLRAICHAH MLPLALTWVP SSNGSDGGYV GHDSVLDSQS 360 GKTILRIHES ACYVNDAKMQ GFFHACTETH LEKGQGIAGR ALKSNLPFFS PNIREYGIKD 420 YPLAHHARKF GLHAAVAIRL RSTYTGDDDY ILEFFLPINC TGSEEQQMLL NNLSSTMQRI 480 CKSLRTVSEA EVDKVDACTA VMYKATSGSC LPTGQSESSS RGDQPATEEA FQDLSLIDKQ 540 RGMSEQAQSS TMRLAEKKRS TAEKNIGMDV LRKYFSGSLK DAAKSLGVCP TTLKRICRTH 600 GISRWPSRKI NKVNRSLKKI QTVINSVHGV DSSLQYDPAT GSLVPAVSLP EKTSFPSCDA 660 VSSPSVGKTV DEKSGPKSEQ GYSSPEGWER ESCQLQRPDA QKGEGDEFHM QTSNYSGSGD 720 HASYGANVTH HINSEGTQEP LYPIGAVSAL HDKETGCIEP SARVLPSIKT TRDQIVGRNS 780 PPAQQADIDM FDDREGREHT HPSTSGMTDS SSGSASSHPT FKKNPARPLK DKSSPALTVK 840 ATYNGDTVRF KFLPSMGWYN LLEEIAKRFK LSMGVFQLKY KDDEDEWVIM ANNSDLQECV 900 DVMDSMGTRN VKLQVRDLPC LISSSGSSSC LQLEGHNS

Sequence ? help Back to Top

Protein Sequence Length: 938 aa Download sequence

MDVPMPSQSN RAGCNGSVGS PSDDPYGVTA MMNFDGYSEL CGSPSLADQL FSLLNDSSTH  60
QMFAMWSSLG SSPRASGVSE DMQLDAYSSV PGDQKVDLVS SVNPAETGTG RMAKSSGDLG  120
SDGDPEQGST SLVPRPIAGN LLADRMLMAL SLFRKSLGGG VLAQVWMPVE QEGHVVLSTC  180
EQPFLLDQAL AGYREVSRHF VFSAKEETGL QPGLPGRVFI SGVPEWTSNV LYYSKPEYLR  240
MEYALHHDVR GSLAMPIYDP SKGSCCAVLE LITKKEKPDF AAEMDNLRHA LQAVNLETAK  300
DCIDQKVYSA NQKAAFTEIL DVLRAICHAH MLPLALTWVP SSNGSDGGYV GHDSVLDSQS  360
GKTILRIHES ACYVNDAKMQ GFFHACTETH LEKGQGIAGR ALKSNLPFFS PNIREYGIKD  420
YPLAHHARKF GLHAAVAIRL RSTYTGDDDY ILEFFLPINC TGSEEQQMLL NNLSSTMQRI  480
CKSLRTVSEA EVDKVDACTA VMYKATSGSC LPTGQSESSS RGDQPATEEA FQDLSLIDKQ  540
RGMSEQAQSS TMRLAEKKRS TAEKNIGMDV LRKYFSGSLK DAAKSLGVCP TTLKRICRTH  600
GISRWPSRKI NKVNRSLKKI QTVINSVHGV DSSLQYDPAT GSLVPAVSLP EKTSFPSCDA  660
VSSPSVGKTV DEKSGPKSEQ GYSSPEGWER ESCQLQRPDA QKGEGDEFHM QTSNYSGSGD  720
HASYGANVTH HINSEGTQEP LYPIGAVSAL HDKETGCIEP SARVLPSIKT TRDQIVGRNS  780
PPAQQADIDM FDDREGREHT HPSTSGMTDS SSGSASSHPT FKKNPARPLK DKSSPALTVK  840
ATYNGDTVRF KFLPSMGWYN LLEEIAKRFK LSMGVFQLKY KDDEDEWVIM ANNSDLQECV  900
DVMDSMGTRN VKLQVRDLPC LISSSGSSSC LQLEGHNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG054220.5