PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG054220.15

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 610aa MW: 66685.7 Da PI: 6.9916

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG054220.15	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.1	3.5e-28	234	285	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i +++l+kyFs+++kdAAk+Lgvc+T+LKriCR +GI+RWP+Rki+++ TRIDC2BG054220.15 234 AEKNIGMDVLRKYFSGSLKDAAKSLGVCPTTLKRICRTHGISRWPSRKINKV 285 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence
MLPLALTWVP SSNGSDGGYV GHDSVLDSQS GKTILRIHES ACYVNDAKMQ GFFHACTETH 60 LEKGQGIAGR ALKSNLPFFS PNIREYGIKD YPLAHHARKF GLHAAVAIRL RSTYTGDDDY 120 ILEFFLPINC TGSEEQQMLL NNLSSTMQRI CKSLRTVSEA EVDKVDACTA VMYKATSGSC 180 LPTGQSESSS RGDQPATEEA FQDLSLIDKQ REASPALQAQ SSTMRLAEKK RSTAEKNIGM 240 DVLRKYFSGS LKDAAKSLGV CPTTLKRICR THGISRWPSR KINKVNRSLK KIQTVINSVH 300 GVDSSLQYDP ATGSLVPAVS LPEKTSFPSC DAVSSPSVGK TVDEKSGPKS EQGYSSPEGW 360 ERESCQLQRP DAQKGEGDEF HMQTSNYSGS GDHASYGANV THHINSEGTQ EPLYPIGAVS 420 ALHDKETGCI EPSARVLPSI KTTRDQIVGR NSPPAQQADI DMFDDREGRE HTHPSTSGMT 480 DSSSGSASSH PTFKKNPARP LKDKSSPALT VKATYNGDTV RFKFLPSMGW YNLLEEIAKR 540 FKLSMGVFQL KYKDDEDEWV IMANNSDLQE CVDVMDSMGT RNVKLQVRDL PCLISSSGSS 600 SCLQLEGHNS

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence

MLPLALTWVP SSNGSDGGYV GHDSVLDSQS GKTILRIHES ACYVNDAKMQ GFFHACTETH  60
LEKGQGIAGR ALKSNLPFFS PNIREYGIKD YPLAHHARKF GLHAAVAIRL RSTYTGDDDY  120
ILEFFLPINC TGSEEQQMLL NNLSSTMQRI CKSLRTVSEA EVDKVDACTA VMYKATSGSC  180
LPTGQSESSS RGDQPATEEA FQDLSLIDKQ REASPALQAQ SSTMRLAEKK RSTAEKNIGM  240
DVLRKYFSGS LKDAAKSLGV CPTTLKRICR THGISRWPSR KINKVNRSLK KIQTVINSVH  300
GVDSSLQYDP ATGSLVPAVS LPEKTSFPSC DAVSSPSVGK TVDEKSGPKS EQGYSSPEGW  360
ERESCQLQRP DAQKGEGDEF HMQTSNYSGS GDHASYGANV THHINSEGTQ EPLYPIGAVS  420
ALHDKETGCI EPSARVLPSI KTTRDQIVGR NSPPAQQADI DMFDDREGRE HTHPSTSGMT  480
DSSSGSASSH PTFKKNPARP LKDKSSPALT VKATYNGDTV RFKFLPSMGW YNLLEEIAKR  540
FKLSMGVFQL KYKDDEDEWV IMANNSDLQE CVDVMDSMGT RNVKLQVRDL PCLISSSGSS  600
SCLQLEGHNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-100	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG054220.15