PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG054220.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 663aa MW: 72852 Da PI: 6.8669

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG054220.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89	3.9e-28	287	338	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i +++l+kyFs+++kdAAk+Lgvc+T+LKriCR +GI+RWP+Rki+++ TRIDC2BG054220.12 287 AEKNIGMDVLRKYFSGSLKDAAKSLGVCPTTLKRICRTHGISRWPSRKINKV 338 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MLVFWELVFI LHCPWTMAVN LETAKDCIDQ KVYSANQKAA FTEILDVLRA ICHAHMLPLA 60 LTWVPSSNGS DGGYVGHDSV LDSQSGKTIL RIHESACYVN DAKMQGFFHA CTETHLEKGQ 120 GIAGRALKSN LPFFSPNIRE YGIKDYPLAH HARKFGLHAA VAIRLRSTYT GDDDYILEFF 180 LPINCTGSEE QQMLLNNLSS TMQRICKSLR TVSEAEVDKV DACTAVMYKA TSGSCLPTGQ 240 SESSSRGDQP ATEEAFQDLS LIDKQRGMSE QAQSSTMRLA EKKRSTAEKN IGMDVLRKYF 300 SGSLKDAAKS LGVCPTTLKR ICRTHGISRW PSRKINKVNR SLKKIQTVIN SVHGVDSSLQ 360 YDPATGSLVP AVSLPEKTSF PSCDAVSSPS VGKTVDEKSG PKSEQGYSSP EGWERESCQL 420 QRPDAQKGEG DEFHMQTSNY SGSGDHASYG ANVTHHINSE GTQEPLYPIG AVSALHDKET 480 GCIEPSARVL PSIKTTRDQI VGRNSPPAQQ ADIDMFDDRE GREHTHPSTS GMTDSSSGSA 540 SSHPTFKKNP ARPLKDKSSP ALTVKATYNG DTVRFKFLPS MGWYNLLEEI AKRFKLSMGV 600 FQLKYKDDED EWVIMANNSD LQECVDVMDS MGTRNVKLQV RDLPCLISSS GSSSCLQLEG 660 HNS

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MLVFWELVFI LHCPWTMAVN LETAKDCIDQ KVYSANQKAA FTEILDVLRA ICHAHMLPLA  60
LTWVPSSNGS DGGYVGHDSV LDSQSGKTIL RIHESACYVN DAKMQGFFHA CTETHLEKGQ  120
GIAGRALKSN LPFFSPNIRE YGIKDYPLAH HARKFGLHAA VAIRLRSTYT GDDDYILEFF  180
LPINCTGSEE QQMLLNNLSS TMQRICKSLR TVSEAEVDKV DACTAVMYKA TSGSCLPTGQ  240
SESSSRGDQP ATEEAFQDLS LIDKQRGMSE QAQSSTMRLA EKKRSTAEKN IGMDVLRKYF  300
SGSLKDAAKS LGVCPTTLKR ICRTHGISRW PSRKINKVNR SLKKIQTVIN SVHGVDSSLQ  360
YDPATGSLVP AVSLPEKTSF PSCDAVSSPS VGKTVDEKSG PKSEQGYSSP EGWERESCQL  420
QRPDAQKGEG DEFHMQTSNY SGSGDHASYG ANVTHHINSE GTQEPLYPIG AVSALHDKET  480
GCIEPSARVL PSIKTTRDQI VGRNSPPAQQ ADIDMFDDRE GREHTHPSTS GMTDSSSGSA  540
SSHPTFKKNP ARPLKDKSSP ALTVKATYNG DTVRFKFLPS MGWYNLLEEI AKRFKLSMGV  600
FQLKYKDDED EWVIMANNSD LQECVDVMDS MGTRNVKLQV RDLPCLISSS GSSSCLQLEG  660
HNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-112	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG054220.12