PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG053700.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | DBB | ||||||||
Protein Properties | Length: 259aa MW: 27708.1 Da PI: 4.6878 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 22.4 | 2.6e-07 | 4 | 46 | 5 | 41 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ +e ++ C ++ lC+ C +++H H++ p TRIDC2BG053700.2 4 QCDACEGAAATVVCCADEAALCARCDVQIHAAnklaskHQRLP 46 6******99*********************6678888888877 PP | |||||||
2 | zf-B_box | 30 | 1.1e-09 | 56 | 95 | 4 | 37 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++C+ +++k++ fC d++ l+C+dC +++H + H TRIDC2BG053700.2 56 PRCDVCQDKPAFVFCVDDRALFCRDCDDSIHVQgtlsanH 95 89*****************************544555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MRIQCDACEG AAATVVCCAD EAALCARCDV QIHAANKLAS KHQRLPLEDA AAAGLPRCDV 60 CQDKPAFVFC VDDRALFCRD CDDSIHVQGT LSANHQRYIA TGIRVGFSSV CSAHADSHPP 120 PPPSKPKAPP TAAIPRTAPV SAAAQEVPSS PFMPSSGWAV EDLLQFSDYE SSDKQKGSPS 180 PLGFKELEWF ADIDLFHDDQ APAPKWGRTA AEVPELFASP QPASNAGFYK TAGARQSKKA 240 KVELPEDDDE DYLIVPDLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06040.1 | 1e-67 | DBB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG053700.2 |