PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG053160.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 929aa    MW: 105510 Da    PI: 8.845
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG053160.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.44.3e-22109199291
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       fY+++A++vGF vr+ ++k    ++ + +++++Cs +g+r+e+ k+   + +++r+r++tr+gC+a++ vk+ + ++++++++ ++HnH ++p
  TRIDC2BG053160.8 109 FYKSFAHRVGFGVRVGQQKVV--DNVVESKRYMCSSQGFRSEKGKRnvkAANKKRKREVTRCGCDAHIYVKRCSGNTYKIHSMIEQHNHGFVP 199
                       9***************99888..889****************9999787788999**********************************9875 PP
2FAR172.21.2e-22242332190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY++YA+++GF+vr+ ++k   +++ +  ++f+Cs+eg+r+++ ++  +ek++r+ ++tr+gC+a+++v+  + ++++v++l ++HnH l+
  TRIDC2BG053160.8 242 EFYKSYARHCGFKVRVGQHKLL-NKEVVQFKRFMCSREGFRSDKGEDpsNEKKKRNVKVTRCGCNAHIVVRWCSGNTYKVSSLIEHHNHGLV 332
                       6****************99887.777799**************99998889999999********************************997 PP
3FAR171.12.6e-22380471190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY++YA+++GFsvr+ + k   +n+ + +++f+Cs+eg+r+e+       +++r+ r++tr+gC+a++ vk+ +d+k+++t+  ++HnH ++
  TRIDC2BG053160.8 380 EFYKSYAHHCGFSVRVGQRKLL-NNEVVQWKRFMCSREGFRSEKCMGvddPSRKRKVRKVTRCGCDARIIVKRCTDNKYKITSWIEHHNHGFV 471
                       6****************97766.8999****************9887777889999**********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 929 aa     Download sequence    
MESVTIVQAQ PFAGINSPLL LDEGRPGTPD RDTTSMPQPV STSMRQLLPS SIFFRNALFY  60
LQVSRLCIVA VVIFSIHMLQ CSTSTSECAD ESKPALGMTF EGLEAVEAFY KSFAHRVGFG  120
VRVGQQKVVD NVVESKRYMC SSQGFRSEKG KRNVKAANKK RKREVTRCGC DAHIYVKRCS  180
GNTYKIHSMI EQHNHGFVPP DKLHLIRSNR GASEKEKVIP DCDEALRPSI GMVFEGLSSA  240
EEFYKSYARH CGFKVRVGQH KLLNKEVVQF KRFMCSREGF RSDKGEDPSN EKKKRNVKVT  300
RCGCNAHIVV RWCSGNTYKV SSLIEHHNHG LVSPDKVTKS KRRVSEKAKN KLSSSLAPEC  360
DEAMKPSVGM VFEDIGSVEE FYKSYAHHCG FSVRVGQRKL LNNEVVQWKR FMCSREGFRS  420
EKCMGVDDPS RKRKVRKVTR CGCDARIIVK RCTDNKYKIT SWIEHHNHGF VSPDKCHLIR  480
SNRQLSDKAK PTVSTHCKAS TCTSQANQPD HVSEGRSDNV GCTKRDLQKY HHDLCSKIKN  540
EDAQIFVAQL CRKQQEDSAF FFDCDVDDQG MLVHVFWADA TSRKNYIYFS DILTFDSTNT  600
MNQHGMIFAP FTGTNHHLQS VSFGAAFLAD EKIESYAWLF QTFLRAMGGV SPKTIVTREN  660
NRMKAAISNV LPATTHRLCM LEMLGRMPEK VEPSLRNNPL FQTRMNECVL GSETVVEFES  720
KWESIISDFG LQGNQWLAER YSTRERWILA YSTDVHLSGI LRSTAWSKSA KSFFNCFINQ  780
KLSLVEFWLR FEAALECQRQ EESNADHTSA YTTPQLITPW GLEKHGSVVF THEVFERFQE  840
EIVAARDHCV VEDMAQNEGV KTVAIGGDDS DKVREVRWDA VAMTANCSCK LFESVGIPCR  900
HINLVLRSSK LNELPSSCVL KRWQKSAKF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1431458RKRKVRKVTRCGCDARIIVKRCTDNKYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-98FAR1 family protein