PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG053160.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 889aa    MW: 100856 Da    PI: 8.7433
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG053160.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.54.1e-2268158291
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       fY+++A++vGF vr+ ++k    ++ + +++++Cs +g+r+e+ k+   + +++r+r++tr+gC+a++ vk+ + ++++++++ ++HnH ++p
  TRIDC2BG053160.5  68 FYKSFAHRVGFGVRVGQQKVV--DNVVESKRYMCSSQGFRSEKGKRnvkAANKKRKREVTRCGCDAHIYVKRCSGNTYKIHSMIEQHNHGFVP 158
                       9***************99888..889****************9999787788999**********************************9875 PP
2FAR172.31.1e-22201291190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY++YA+++GF+vr+ ++k   +++ +  ++f+Cs+eg+r+++ ++  +ek++r+ ++tr+gC+a+++v+  + ++++v++l ++HnH l+
  TRIDC2BG053160.5 201 EFYKSYARHCGFKVRVGQHKLL-NKEVVQFKRFMCSREGFRSDKGEDpsNEKKKRNVKVTRCGCNAHIVVRWCSGNTYKVSSLIEHHNHGLV 291
                       6****************99887.777799**************99998889999999********************************997 PP
3FAR171.12.5e-22339430190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY++YA+++GFsvr+ + k   +n+ + +++f+Cs+eg+r+e+       +++r+ r++tr+gC+a++ vk+ +d+k+++t+  ++HnH ++
  TRIDC2BG053160.5 339 EFYKSYAHHCGFSVRVGQRKLL-NNEVVQWKRFMCSREGFRSEKCMGvddPSRKRKVRKVTRCGCDARIIVKRCTDNKYKITSWIEHHNHGFV 430
                       6****************97766.8999****************9887777889999**********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 889 aa     Download sequence    
MESVTIVQAQ PFAGINSPLL LDEGRPGTPD RDTTSMPQPC STSTSECADE SKPALGMTFE  60
GLEAVEAFYK SFAHRVGFGV RVGQQKVVDN VVESKRYMCS SQGFRSEKGK RNVKAANKKR  120
KREVTRCGCD AHIYVKRCSG NTYKIHSMIE QHNHGFVPPD KLHLIRSNRG ASEKEKVIPD  180
CDEALRPSIG MVFEGLSSAE EFYKSYARHC GFKVRVGQHK LLNKEVVQFK RFMCSREGFR  240
SDKGEDPSNE KKKRNVKVTR CGCNAHIVVR WCSGNTYKVS SLIEHHNHGL VSPDKVTKSK  300
RRVSEKAKNK LSSSLAPECD EAMKPSVGMV FEDIGSVEEF YKSYAHHCGF SVRVGQRKLL  360
NNEVVQWKRF MCSREGFRSE KCMGVDDPSR KRKVRKVTRC GCDARIIVKR CTDNKYKITS  420
WIEHHNHGFV SPDKCHLIRS NRQLSDKAKP TVSTHCKAST CTSQANQPDH VSEGRSDNVG  480
CTKRDLQKYH HDLCSKIKNE DAQIFVAQLC RKQQEDSAFF FDCDVDDQGM LVHVFWADAT  540
SRKNYIYFSD ILTFDSTNTM NQHGMIFAPF TGTNHHLQSV SFGAAFLADE KIESYAWLFQ  600
TFLRAMGGVS PKTIVTRENN RMKAAISNVL PATTHRLCML EMLGRMPEKV EPSLRNNPLF  660
QTRMNECVLG SETVVEFESK WESIISDFGL QGNQWLAERY STRERWILAY STDVHLSGIL  720
RSTAWSKSAK SFFNCFINQK LSLVEFWLRF EAALECQRQE ESNADHTSAY TTPQLITPWG  780
LEKHGSVVFT HEVFERFQEE IVAARDHCVV EDMAQNEGVK TVAIGGDDSD KVREVRWDAV  840
AMTANCSCKL FESVGIPCRH INLVLRSSKL NELPSSCVLK RWQKSAKFG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1390417RKRKVRKVTRCGCDARIIVKRCTDNKYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-99FAR1 family protein