PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG053160.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 591aa MW: 67491.7 Da PI: 7.899

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG053160.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72	1.4e-22	41	132	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA+++GFsvr+ + k +n+ + +++f+Cs+eg+r+e+ +++r+ r++tr+gC+a++ vk+ +d+k+++t+ ++HnH ++ TRIDC2BG053160.4 41 EFYKSYAHHCGFSVRVGQRKLL-NNEVVQWKRFMCSREGFRSEKCMGvddPSRKRKVRKVTRCGCDARIIVKRCTDNKYKITSWIEHHNHGFV 132 6**************97766.8999************9887777889999********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MHHGTYRSGF LMLQSSLAPE CDEAMKPSVG MVFEDIGSVE EFYKSYAHHC GFSVRVGQRK 60 LLNNEVVQWK RFMCSREGFR SEKCMGVDDP SRKRKVRKVT RCGCDARIIV KRCTDNKYKI 120 TSWIEHHNHG FVSPDKCHLI RSNRQLSDKA KPTVSTHCKA STCTSQANQP DHVSEGRSDN 180 VGCTKRDLQK YHHDLCSKIK NEDAQIFVAQ LCRKQQEDSA FFFDCDVDDQ GMLVHVFWAD 240 ATSRKNYIYF SDILTFDSTN TMNQHGMIFA PFTGTNHHLQ SVSFGAAFLA DEKIESYAWL 300 FQTFLRAMGG VSPKTIVTRE NNRMKAAISN VLPATTHRLC MLEMLGRMPE KVEPSLRNNP 360 LFQTRMNECV LGSETVVEFE SKWESIISDF GLQGNQWLAE RYSTRERWIL AYSTDVHLSG 420 ILRSTAWSKS AKSFFNCFIN QKLSLVEFWL RFEAALECQR QEESNADHTS AYTTPQLITP 480 WGLEKHGSVV FTHEVFERFQ EEIVAARDHC VVEDMAQNEG VKTVAIGGDD SDKVREVRWD 540 AVAMTANCSC KLFESVGIPC RHINLVLRSS KLNELPSSCV LKRWQKSAKF G

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MHHGTYRSGF LMLQSSLAPE CDEAMKPSVG MVFEDIGSVE EFYKSYAHHC GFSVRVGQRK  60
LLNNEVVQWK RFMCSREGFR SEKCMGVDDP SRKRKVRKVT RCGCDARIIV KRCTDNKYKI  120
TSWIEHHNHG FVSPDKCHLI RSNRQLSDKA KPTVSTHCKA STCTSQANQP DHVSEGRSDN  180
VGCTKRDLQK YHHDLCSKIK NEDAQIFVAQ LCRKQQEDSA FFFDCDVDDQ GMLVHVFWAD  240
ATSRKNYIYF SDILTFDSTN TMNQHGMIFA PFTGTNHHLQ SVSFGAAFLA DEKIESYAWL  300
FQTFLRAMGG VSPKTIVTRE NNRMKAAISN VLPATTHRLC MLEMLGRMPE KVEPSLRNNP  360
LFQTRMNECV LGSETVVEFE SKWESIISDF GLQGNQWLAE RYSTRERWIL AYSTDVHLSG  420
ILRSTAWSKS AKSFFNCFIN QKLSLVEFWL RFEAALECQR QEESNADHTS AYTTPQLITP  480
WGLEKHGSVV FTHEVFERFQ EEIVAARDHC VVEDMAQNEG VKTVAIGGDD SDKVREVRWD  540
AVAMTANCSC KLFESVGIPC RHINLVLRSS KLNELPSSCV LKRWQKSAKF G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	92	119	RKRKVRKVTRCGCDARIIVKRCTDNKYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-102	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG053160.4