PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG053160.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 567aa MW: 64828.7 Da PI: 8.087

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG053160.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72	1.3e-22	17	108	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA+++GFsvr+ + k +n+ + +++f+Cs+eg+r+e+ +++r+ r++tr+gC+a++ vk+ +d+k+++t+ ++HnH ++ TRIDC2BG053160.3 17 EFYKSYAHHCGFSVRVGQRKLL-NNEVVQWKRFMCSREGFRSEKCMGvddPSRKRKVRKVTRCGCDARIIVKRCTDNKYKITSWIEHHNHGFV 108 6**************97766.8999************9887777889999********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MKPSVGMVFE DIGSVEEFYK SYAHHCGFSV RVGQRKLLNN EVVQWKRFMC SREGFRSEKC 60 MGVDDPSRKR KVRKVTRCGC DARIIVKRCT DNKYKITSWI EHHNHGFVSP DKCHLIRSNR 120 QLSDKAKPTV STHCKASTCT SQANQPDHVS EGRSDNVGCT KRDLQKYHHD LCSKIKNEDA 180 QIFVAQLCRK QQEDSAFFFD CDVDDQGMLV HVFWADATSR KNYIYFSDIL TFDSTNTMNQ 240 HGMIFAPFTG TNHHLQSVSF GAAFLADEKI ESYAWLFQTF LRAMGGVSPK TIVTRENNRM 300 KAAISNVLPA TTHRLCMLEM LGRMPEKVEP SLRNNPLFQT RMNECVLGSE TVVEFESKWE 360 SIISDFGLQG NQWLAERYST RERWILAYST DVHLSGILRS TAWSKSAKSF FNCFINQKLS 420 LVEFWLRFEA ALECQRQEES NADHTSAYTT PQLITPWGLE KHGSVVFTHE VFERFQEEIV 480 AARDHCVVED MAQNEGVKTV AIGGDDSDKV REVRWDAVAM TANCSCKLFE SVGIPCRHIN 540 LVLRSSKLNE LPSSCVLKRW QKSAKFG

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MKPSVGMVFE DIGSVEEFYK SYAHHCGFSV RVGQRKLLNN EVVQWKRFMC SREGFRSEKC  60
MGVDDPSRKR KVRKVTRCGC DARIIVKRCT DNKYKITSWI EHHNHGFVSP DKCHLIRSNR  120
QLSDKAKPTV STHCKASTCT SQANQPDHVS EGRSDNVGCT KRDLQKYHHD LCSKIKNEDA  180
QIFVAQLCRK QQEDSAFFFD CDVDDQGMLV HVFWADATSR KNYIYFSDIL TFDSTNTMNQ  240
HGMIFAPFTG TNHHLQSVSF GAAFLADEKI ESYAWLFQTF LRAMGGVSPK TIVTRENNRM  300
KAAISNVLPA TTHRLCMLEM LGRMPEKVEP SLRNNPLFQT RMNECVLGSE TVVEFESKWE  360
SIISDFGLQG NQWLAERYST RERWILAYST DVHLSGILRS TAWSKSAKSF FNCFINQKLS  420
LVEFWLRFEA ALECQRQEES NADHTSAYTT PQLITPWGLE KHGSVVFTHE VFERFQEEIV  480
AARDHCVVED MAQNEGVKTV AIGGDDSDKV REVRWDAVAM TANCSCKLFE SVGIPCRHIN  540
LVLRSSKLNE LPSSCVLKRW QKSAKFG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	68	95	RKRKVRKVTRCGCDARIIVKRCTDNKYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-102	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG053160.3