PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG053160.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 699aa MW: 79858.9 Da PI: 8.6736

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG053160.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.7	8e-23	11	101	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA+++GF+vr+ ++k +++ + ++f+Cs+eg+r+++ ++ +ek++r+ ++tr+gC+a+++v+ + ++++v++l ++HnH l+ TRIDC2BG053160.2 11 EFYKSYARHCGFKVRVGQHKLL-NKEVVQFKRFMCSREGFRSDKGEDpsNEKKKRNVKVTRCGCNAHIVVRWCSGNTYKVSSLIEHHNHGLV 101 6**************99887.777799**********99998889999999******************************997 PP
2	FAR1	71.6	1.8e-22	149	240	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA+++GFsvr+ + k +n+ + +++f+Cs+eg+r+e+ +++r+ r++tr+gC+a++ vk+ +d+k+++t+ ++HnH ++ TRIDC2BG053160.2 149 EFYKSYAHHCGFSVRVGQRKLL-NNEVVQWKRFMCSREGFRSEKCMGvddPSRKRKVRKVTRCGCDARIIVKRCTDNKYKITSWIEHHNHGFV 240 6**************97766.8999************9887777889999********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 699 aa Download sequence
MVFEGLSSAE EFYKSYARHC GFKVRVGQHK LLNKEVVQFK RFMCSREGFR SDKGEDPSNE 60 KKKRNVKVTR CGCNAHIVVR WCSGNTYKVS SLIEHHNHGL VSPDKVTKSK RRVSEKAKNK 120 LSSSLAPECD EAMKPSVGMV FEDIGSVEEF YKSYAHHCGF SVRVGQRKLL NNEVVQWKRF 180 MCSREGFRSE KCMGVDDPSR KRKVRKVTRC GCDARIIVKR CTDNKYKITS WIEHHNHGFV 240 SPDKCHLIRS NRQLSDKAKP TVSTHCKAST CTSQANQPDH VSEGRSDNVG CTKRDLQKYH 300 HDLCSKIKNE DAQIFVAQLC RKQQEDSAFF FDCDVDDQGM LVHVFWADAT SRKNYIYFSD 360 ILTFDSTNTM NQHGMIFAPF TGTNHHLQSV SFGAAFLADE KIESYAWLFQ TFLRAMGGVS 420 PKTIVTRENN RMKAAISNVL PATTHRLCML EMLGRMPEKV EPSLRNNPLF QTRMNECVLG 480 SETVVEFESK WESIISDFGL QGNQWLAERY STRERWILAY STDVHLSGIL RSTAWSKSAK 540 SFFNCFINQK LSLVEFWLRF EAALECQRQE ESNADHTSAY TTPQLITPWG LEKHGSVVFT 600 HEVFERFQEE IVAARDHCVV EDMAQNEGVK TVAIGGDDSD KVREVRWDAV AMTANCSCKL 660 FESVGIPCRH INLVLRSSKL NELPSSCVLK RWQKSAKFG

Sequence ? help Back to Top

Protein Sequence Length: 699 aa Download sequence

MVFEGLSSAE EFYKSYARHC GFKVRVGQHK LLNKEVVQFK RFMCSREGFR SDKGEDPSNE  60
KKKRNVKVTR CGCNAHIVVR WCSGNTYKVS SLIEHHNHGL VSPDKVTKSK RRVSEKAKNK  120
LSSSLAPECD EAMKPSVGMV FEDIGSVEEF YKSYAHHCGF SVRVGQRKLL NNEVVQWKRF  180
MCSREGFRSE KCMGVDDPSR KRKVRKVTRC GCDARIIVKR CTDNKYKITS WIEHHNHGFV  240
SPDKCHLIRS NRQLSDKAKP TVSTHCKAST CTSQANQPDH VSEGRSDNVG CTKRDLQKYH  300
HDLCSKIKNE DAQIFVAQLC RKQQEDSAFF FDCDVDDQGM LVHVFWADAT SRKNYIYFSD  360
ILTFDSTNTM NQHGMIFAPF TGTNHHLQSV SFGAAFLADE KIESYAWLFQ TFLRAMGGVS  420
PKTIVTRENN RMKAAISNVL PATTHRLCML EMLGRMPEKV EPSLRNNPLF QTRMNECVLG  480
SETVVEFESK WESIISDFGL QGNQWLAERY STRERWILAY STDVHLSGIL RSTAWSKSAK  540
SFFNCFINQK LSLVEFWLRF EAALECQRQE ESNADHTSAY TTPQLITPWG LEKHGSVVFT  600
HEVFERFQEE IVAARDHCVV EDMAQNEGVK TVAIGGDDSD KVREVRWDAV AMTANCSCKL  660
FESVGIPCRH INLVLRSSKL NELPSSCVLK RWQKSAKFG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	200	227	RKRKVRKVTRCGCDARIIVKRCTDNKYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-101	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG053160.2