PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG053160.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 950aa    MW: 107290 Da    PI: 8.7886
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG053160.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.34.4e-22129219291
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       fY+++A++vGF vr+ ++k    ++ + +++++Cs +g+r+e+ k+   + +++r+r++tr+gC+a++ vk+ + ++++++++ ++HnH ++p
  TRIDC2BG053160.1 129 FYKSFAHRVGFGVRVGQQKVV--DNVVESKRYMCSSQGFRSEKGKRnvkAANKKRKREVTRCGCDAHIYVKRCSGNTYKIHSMIEQHNHGFVP 219
                       9***************99888..889****************9999787788999**********************************9875 PP
2FAR172.11.2e-22262352190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY++YA+++GF+vr+ ++k   +++ +  ++f+Cs+eg+r+++ ++  +ek++r+ ++tr+gC+a+++v+  + ++++v++l ++HnH l+
  TRIDC2BG053160.1 262 EFYKSYARHCGFKVRVGQHKLL-NKEVVQFKRFMCSREGFRSDKGEDpsNEKKKRNVKVTRCGCNAHIVVRWCSGNTYKVSSLIEHHNHGLV 352
                       6****************99887.777799**************99998889999999********************************997 PP
3FAR1712.7e-22400491190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY++YA+++GFsvr+ + k   +n+ + +++f+Cs+eg+r+e+       +++r+ r++tr+gC+a++ vk+ +d+k+++t+  ++HnH ++
  TRIDC2BG053160.1 400 EFYKSYAHHCGFSVRVGQRKLL-NNEVVQWKRFMCSREGFRSEKCMGvddPSRKRKVRKVTRCGCDARIIVKRCTDNKYKITSWIEHHNHGFV 491
                       6****************97766.8999****************9887777889999**********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 950 aa     Download sequence    
TAIDLHSASA PPALRRTVLL QSPPNPRIRE ARHPRLLGSP QGHSLDPAIR ALSADSGDEP  60
AMESVTIVQA QPFAGINSPL LLDEGRPGTP DRDTTSMPQP CSTSTSECAD ESKPALGMTF  120
EGLEAVEAFY KSFAHRVGFG VRVGQQKVVD NVVESKRYMC SSQGFRSEKG KRNVKAANKK  180
RKREVTRCGC DAHIYVKRCS GNTYKIHSMI EQHNHGFVPP DKLHLIRSNR GASEKEKVIP  240
DCDEALRPSI GMVFEGLSSA EEFYKSYARH CGFKVRVGQH KLLNKEVVQF KRFMCSREGF  300
RSDKGEDPSN EKKKRNVKVT RCGCNAHIVV RWCSGNTYKV SSLIEHHNHG LVSPDKVTKS  360
KRRVSEKAKN KLSSSLAPEC DEAMKPSVGM VFEDIGSVEE FYKSYAHHCG FSVRVGQRKL  420
LNNEVVQWKR FMCSREGFRS EKCMGVDDPS RKRKVRKVTR CGCDARIIVK RCTDNKYKIT  480
SWIEHHNHGF VSPDKCHLIR SNRQLSDKAK PTVSTHCKAS TCTSQANQPD HVSEGRSDNV  540
GCTKRDLQKY HHDLCSKIKN EDAQIFVAQL CRKQQEDSAF FFDCDVDDQG MLVHVFWADA  600
TSRKNYIYFS DILTFDSTNT MNQHGMIFAP FTGTNHHLQS VSFGAAFLAD EKIESYAWLF  660
QTFLRAMGGV SPKTIVTREN NRMKAAISNV LPATTHRLCM LEMLGRMPEK VEPSLRNNPL  720
FQTRMNECVL GSETVVEFES KWESIISDFG LQGNQWLAER YSTRERWILA YSTDVHLSGI  780
LRSTAWSKSA KSFFNCFINQ KLSLVEFWLR FEAALECQRQ EESNADHTSA YTTPQLITPW  840
GLEKHGSVVF THEVFERFQE EIVAARDHCV VEDMAQNEGV KTVAIGGDDS DKVREVRWDA  900
VAMTANCSCK LFESVGIPCR HINLVLRSSK LNELPSSCVL KRWQKSAKFG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1451478RKRKVRKVTRCGCDARIIVKRCTDNKYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-98FAR1 family protein