PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG051850.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 176aa MW: 19626.8 Da PI: 8.2514 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 53.3 | 9.4e-17 | 5 | 86 | 59 | 128 |
NAM 59 yfFskrdkkyatgkrknra.........tksgyWkatgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128 +fF+k +++y gkrk+r+ ++ +W++tgk++++l+++g +g kk+Lv+y ++ k+ekt+W mh+y+l TRIDC2BG051850.1 5 HFFHKVSNAYVVGKRKRRKisnsehtvcDENLRWHKTGKSRSILDNNGVIKGWKKILVLYigyRKGGGKTEKTNWRMHQYHL 86 9*****************867777766544778***************************65544555668*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
GSTGHFFHKV SNAYVVGKRK RRKISNSEHT VCDENLRWHK TGKSRSILDN NGVIKGWKKI 60 LVLYIGYRKG GGKTEKTNWR MHQYHLGVDQ DEKQEELVVS KVFYQVQSMN DSLPLQTRCP 120 NGSPSGTEQN QEEGQSGMST VREAVEWLAG SSSHAVEDAP LSGLDEHLSS DGTPDA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 18 | 23 | KRKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28500.1 | 4e-33 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG051850.1 |