PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG051840.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 323aa    MW: 35892.2 Da    PI: 4.8602
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG051840.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM942.4e-29151581128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........t 78 
                       lp+G++F+Ptd el+ e+L+ kv +      ++ +  +ike+ +i++++P++Lp  +k + +  +fF+k +++y  gkrk+r+          
  TRIDC2BG051840.5  15 LPAGVKFDPTDLELL-EHLEGKVGRVAshvlIDDFIpTIKEAqGICYTHPENLP-GIKMDGSTGHFFHKVSNAYVVGKRKRRKisnsdhtvcD 105
                       799************.99****9998855453333335888878**********.666778899******************86777776654 PP

               NAM  79 ksgyWkatgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                       ++ +W++tgk++++l+++g  +g kk+Lv+y   ++   k+ekt+W mh+y+l
  TRIDC2BG051840.5 106 ENLRWHKTGKSRSILDNNGVIKGWKKILVLYigyRKGGGKTEKTNWRMHQYHL 158
                       5788***************************65544555668*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
TSCFVLQVLS QWPGLPAGVK FDPTDLELLE HLEGKVGRVA SHVLIDDFIP TIKEAQGICY  60
THPENLPGIK MDGSTGHFFH KVSNAYVVGK RKRRKISNSD HTVCDENLRW HKTGKSRSIL  120
DNNGVIKGWK KILVLYIGYR KGGGKTEKTN WRMHQYHLGV DQDEKQEELV VSKVFYQVQS  180
MNAGQSLVCG VNEEFDSFAG EDDPTTPMTY PLQTRYPNGS PSGTEQNQEE GESRVSTVRE  240
AGEWLAGSSS HAMDDAAVSG LDEHLSHGRI PEEALLGFPD LGMPPDVSLL TDMQLGSQDS  300
MEMWLVSVLT EDEGVFEAAE QRE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19095KRKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.12e-64NAC family protein