PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG051840.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 285aa    MW: 32287.5 Da    PI: 6.346
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG051840.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.41.8e-29521951128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........t 78 
                       lp+G++F+Ptd el+ e+L+ kv +      ++ +  +ike+ +i++++P++Lp  +k + +  +fF+k +++y  gkrk+r+          
  TRIDC2BG051840.4  52 LPAGVKFDPTDLELL-EHLEGKVGRVAshvlIDDFIpTIKEAqGICYTHPENLP-GIKMDGSTGHFFHKVSNAYVVGKRKRRKisnsdhtvcD 142
                       799************.99****9998855453333335888878**********.666778899******************86777776654 PP

               NAM  79 ksgyWkatgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                       ++ +W++tgk++++l+++g  +g kk+Lv+y   ++   k+ekt+W mh+y+l
  TRIDC2BG051840.4 143 ENLRWHKTGKSRSILDNNGVIKGWKKILVLYigyRKGGGKTEKTNWRMHQYHL 195
                       5788***************************65544555668*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MAESLIVTAK TIATMIIHPS LCKIEELLAW MECPNCKYRI DNTDVLSQWP GLPAGVKFDP  60
TDLELLEHLE GKVGRVASHV LIDDFIPTIK EAQGICYTHP ENLPGIKMDG STGHFFHKVS  120
NAYVVGKRKR RKISNSDHTV CDENLRWHKT GKSRSILDNN GVIKGWKKIL VLYIGYRKGG  180
GKTEKTNWRM HQYHLGVDQD EKQEELVVSK VFYQVQSMNA GQSLVCGVNE EFDSFAGEDD  240
PTTPMTYPLQ TRYPNGSPSG TEQNQDSFSE YWINSTDLLV NYWDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127132KRKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.19e-70NAC family protein