PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG050430.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 328aa    MW: 36443.2 Da    PI: 9.2314
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG050430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.1e-05103124323
                       ETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                       C  Cg+ F+ ++ L rH  t H
  TRIDC2BG050430.1 103 CRVCGRKFRARDALLRHFDTiH 124
                       9****************88877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MSRPLYNLRR RLLASTLRLL PSPSHRLSTT TSTPATRAPT TPVAVLWELA ASRPPSKLPL  60
YDSAVRLHLA ASSFGRLRFS AAFLHPCHRL PDPDPSADAT NLCRVCGRKF RARDALLRHF  120
DTIHTRENTK RLERIESSRG DRRVRLAASL SLKLSKYTKA ARELTAGVNP GSPADELRRA  180
RVHAELSRYP STALRDRAQE VLDDGSVGCL MLVSGREELS PLLRLAKEKG VRTVVVGGES  240
GLARWADTGF TWAEVIAGKA RKAAPSMSGK WRDRDVLKGL EWRYEDDEEE EVVFEEDGDE  300
DGSEELAGSA NGKPWWKLES DGDDSFCT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12240.16e-44C2H2 family protein