PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG050060.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 386aa MW: 41413.5 Da PI: 7.024

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG050060.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174	4.3e-54	45	170	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+++yL+kkv++ ++ + +++ +d++k+ePwdLp+ ++ +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkdk+++ TRIDC2BG050060.3 45 LPPGFRFHPTDEELITHYLAKKVADARFAA-LAVSVADLNKCEPWDLPSLARMGEKEWYFFCLKDRKYPTGLRTNRATESGYWKATGKDKDIF 136 79***********************999.569999*******8778899************************************ PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++lvg+kktLvfy+grapkg k+ Wvmheyrl TRIDC2BG050060.3 137 R-GKALVGMKKTLVFYTGRAPKGDKSGWVMHEYRL 170 .99****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
LFSLNNSPSI HPLPIESISS SSAVLKEGQK EVMEHGEQEQ HAMDLPPGFR FHPTDEELIT 60 HYLAKKVADA RFAALAVSVA DLNKCEPWDL PSLARMGEKE WYFFCLKDRK YPTGLRTNRA 120 TESGYWKATG KDKDIFRGKA LVGMKKTLVF YTGRAPKGDK SGWVMHEYRL NAKLHAASTS 180 RGSLSGGRAA SSKNEWVLCR VFKKSLVGGV VSSAPASSAA KKGGVGMIEE IGSSVADVTP 240 LPPLLDMSGS GASFVDPAAH VTCFSNNALE AGQFFNPTAT GGCATDADHH GLASSYSPLA 300 SFTQYGGQLH HGVSLSLVQL LESSGYHRGL ADDMAPCGNQ QQPAACKGER ERLSASQDTG 360 LTSDVNPEIS SSFGQTFDHE PAPWGY

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

LFSLNNSPSI HPLPIESISS SSAVLKEGQK EVMEHGEQEQ HAMDLPPGFR FHPTDEELIT  60
HYLAKKVADA RFAALAVSVA DLNKCEPWDL PSLARMGEKE WYFFCLKDRK YPTGLRTNRA  120
TESGYWKATG KDKDIFRGKA LVGMKKTLVF YTGRAPKGDK SGWVMHEYRL NAKLHAASTS  180
RGSLSGGRAA SSKNEWVLCR VFKKSLVGGV VSSAPASSAA KKGGVGMIEE IGSSVADVTP  240
LPPLLDMSGS GASFVDPAAH VTCFSNNALE AGQFFNPTAT GGCATDADHH GLASSYSPLA  300
SFTQYGGQLH HGVSLSLVQL LESSGYHRGL ADDMAPCGNQ QQPAACKGER ERLSASQDTG  360
LTSDVNPEIS SSFGQTFDHE PAPWGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	9e-87	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG050060.3