PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG047770.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 321aa MW: 36608 Da PI: 7.2104

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG047770.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59	1.5e-18	49	142	2	90
FAR1 2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHel 89 Y+ +Ak++GFs+r+++++ + + t+r fvC + g++ + + k++r+r+++r+gC+a l++ ++ +w+vt ++++HnHel TRIDC2BG047770.5 49 LYSGFAKQCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPAKPFDdGAKQQRNRKSSRCGCQAYLRIGRDAgagGLEWRVTGFSNHHNHEL 141 79**********9998877356667999*****998887664678899*************99877789***********9 PP FAR1 90 a 90 TRIDC2BG047770.5 142 L 142 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MERPSSGEEG ERDSPNERRI SLETAAAEAD DSVPYIGQRF PTHEAAYELY SGFAKQCGFS 60 IRRHRTEGKD GVGKGLTRRY FVCHRAGNTP AKPFDDGAKQ QRNRKSSRCG CQAYLRIGRD 120 AGAGGLEWRV TGFSNHHNHE LLRQDEVRFL PAYRVISDSD RDRILVFAKS GISVQQMMRI 180 MELEKCVQPG NLPFTDKDVR NLIHSFRRFD QEDEIVDLLK MCRNVKEKDP NFKYDYTKDA 240 SNCLENIAWS YASSIQSYEV FGDAVVFDTT HRLTSIDMTL GIWIGMNNHG MPCFFSCALL 300 REGNLQSFTW ALQKSSTDNI D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	1e-161	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG047770.5