PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG047610.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 486aa    MW: 53896.7 Da    PI: 6.8781
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG047610.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.34.3e-1112575299
                      .EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 52 yrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      + ++++r++lt+GW+ Fv++++L +gD ++F   + +++el+v+v+r+
  TRIDC2BG047610.7 12 FGGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RGENGELRVGVRRH 57
                      467899**************************..449999******96 PP
2Auxin_resp100.81.8e-3382167183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvs...dldpvrWpnSkWrsLk 83 
                       a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+    +++++ W +S W+sLk
  TRIDC2BG047610.7  82 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGstpTMSTSPWADSDWKSLK 167
                       789*************************************************************997222578889********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    
SMELTGIFVT YFGGQPRRHL LTTGWSVFVS SKRLVAGDAF IFLRGENGEL RVGVRRHMRQ  60
VNNMPSSVIS SHSMHLGVLA TASHAISTGT LFSVFYKPRT SQSEFVVSVN KYLEAKKQNI  120
SVGMRFKMKF EGDEALERRF SGTIIGIGST PTMSTSPWAD SDWKSLKVQW DEPSSILRPD  180
RVSPWELEPL DAANPQPPQP PLRNKRPRLP ASSSVVPELA PKFGLWKSPA EPSQTLSFSE  240
PQQARGLFTN SRFSSSSNVA FNQFYWPARE SREDSYAGST NKVTVERKLE PTAGGCRLFG  300
IEIRSAVEET QPVLTVSGDG YDQTAASVDV DSGELSQPSN INNSGAQAAS SERALLETQS  360
RQVRSCTKVI MTGMAVGRAV DLTKLYGYVD LHRKLEEMFD IQGELCSTLK KWQVVYADEE  420
DDMMLVGDDP WDEFCSMAKR IYIYTYEEAK QLAPKATKLS RVNSSHESVT PQSGSEYPAS  480
FANADC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.40.0ARF family protein