PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG047330.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 238aa MW: 27351.4 Da PI: 8.4096 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 18.9 | 2.6e-06 | 182 | 203 | 3 | 26 |
S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHg 26 e Cr++++ C++ ++C+FaH+ TRIDC2BG047330.7 182 VEVCRDYLK-KMCNR-ESCRFAHP 203 589******.*****.*******9 PP | |||||||
2 | zf-CCCH | 20.9 | 6.3e-07 | 213 | 235 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 k e Cr+f r G+C + ++C+F H+ TRIDC2BG047330.7 213 KVEVCRDFKR-GECTR-PTCRFYHP 235 89********.*****.*******8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
EACRDYLRDR CTRSDLECKY AHPHQSVSVD RDSKVTACAD SLRNNCFRGR TCRYYHPPPH 60 IQESLLRSIG LDVPPVKTVC RDFARGRCSR SANECRFLHH SSVQECAIVC QDFLRGRCDR 120 ISCRYTHVIA QPMLPPPMRD VPMQMPYPEM VYMPPPPPPL GVPMMAPPLS PPRGFADNKS 180 TVEVCRDYLK KMCNRESCRF AHPDSQTEVA HDKVEVCRDF KRGECTRPTC RFYHPSSS |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG047330.7 |