PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG047330.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 161aa MW: 18493.4 Da PI: 8.2542 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 19.7 | 1.5e-06 | 105 | 126 | 3 | 26 |
S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHg 26 e Cr++++ C++ ++C+FaH+ TRIDC2BG047330.5 105 VEVCRDYLK-KMCNR-ESCRFAHP 126 589******.*****.*******9 PP | |||||||
2 | zf-CCCH | 21.7 | 3.6e-07 | 136 | 158 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 k e Cr+f r G+C + ++C+F H+ TRIDC2BG047330.5 136 KVEVCRDFKR-GECTR-PTCRFYHP 158 89********.*****.*******8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
EVCRDFARGR CSRSANECRF LHHSSVQECA IVCQDFLRGR CDRISCRYTH VIAQPMLPPP 60 MRDVPMQMPY PEMVYMPPPP PPLGVPMMAP PLSPPRGFAD NKSTVEVCRD YLKKMCNRES 120 CRFAHPDSQT EVAHDKVEVC RDFKRGECTR PTCRFYHPSS S |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG047330.5 |