PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG046820.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 486aa    MW: 52059.3 Da    PI: 6.6068
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG046820.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS273.75.6e-84734752374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                        +lLl+ A a + gd+++a  +L+++  +as +g dp qR+aayf+ ALa+rl+   +  +ka ++++t++++ +e++ a+++f+++sP+++f
  TRIDC2BG046820.1  73 MRLLLSSAVAGEVGDTHAAAVALQEVYRQASFRGgDPAQRVAAYFADALASRLLL--PPPAKAKTTTTTTTTTREEQFLAFTMFYQASPFYQF 163
                       6899*************************999998*******************9..6666666666666678999999************** PP

              GRAS  94 shltaNqaIleavege..ervHiiDfdisqGlQWpaLlqaLasRp..eg..............ppslRiTgvgspesgskeeleetgerLakf 168
                       +h+taNqaI+ea+e    +r+H++Dfd+s G+QWp+L+q+L++ +  ++              p slRiTg+g+    s++el+ t+ rLa+f
  TRIDC2BG046820.1 164 AHFTANQAIVEAFEAGgrRRLHVVDFDVSFGFQWPSLIQSLSDAAttSSsessqdgsgdccdePVSLRITGFGA----SADELRDTEARLARF 252
                       *************9766699*********************987744115677888999999777*********....9************** PP

              GRAS 169 Aeel.gvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe.........adhnse 251
                       A+ + +++fef+ +v +  ed + e+++ +p  +++Vnlv+   +   ++ s    +++ L  ++sl+P +v ++++            ++s+
  TRIDC2BG046820.1 253 ADGCpNLRFEFEGVVNNGPEDGRHERIKNDPAATVVVNLVFPAAQNA-RPSSW--DTRSALAHIRSLNPSLVFLIDKIdegsggkgaGRCGSA 342
                       **9769*******9999************************777765.33333..3589***************9973234444442334777 PP

              GRAS 252 sFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhet....lekWrerleeaGFkpvplsekaakqakll 340
                       s+l +f+  l+yy+a+f+sl++ lp++s eri +Er  lg ei+++ a   ++r +  +      + W+erle+aGF+ ++ls+++++qakll
  TRIDC2BG046820.1 343 SLLPQFAANLRYYAAVFESLHECLPADSAERIAIERDHLGVEISDAMASLDRRRHNGDRAadqiSRGWKERLESAGFEDARLSSRTVSQAKLL 435
                       ************************************************9999987654441111677************************** PP

              GRAS 341 lrkvk.sdg...yrveee.sgslv.lgWkdrpLvsvSaWr 374
                       l++ + + g   +rv e  +g ++ lgW+dr+L+++SaWr
  TRIDC2BG046820.1 436 LKMKSgGCGgggFRVIEAgDGKAMaLGWRDRALITASAWR 475
                       *987643333449998664555555**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    
MNLTLSLGVN GGGAAAKKRK VMDGAGDVGV LGAGDGGDRS TVMRLLQARD RMVKVELDHD  60
DGDVSDRGAS PLMRLLLSSA VAGEVGDTHA AAVALQEVYR QASFRGGDPA QRVAAYFADA  120
LASRLLLPPP AKAKTTTTTT TTTREEQFLA FTMFYQASPF YQFAHFTANQ AIVEAFEAGG  180
RRRLHVVDFD VSFGFQWPSL IQSLSDAATT SSSESSQDGS GDCCDEPVSL RITGFGASAD  240
ELRDTEARLA RFADGCPNLR FEFEGVVNNG PEDGRHERIK NDPAATVVVN LVFPAAQNAR  300
PSSWDTRSAL AHIRSLNPSL VFLIDKIDEG SGGKGAGRCG SASLLPQFAA NLRYYAAVFE  360
SLHECLPADS AERIAIERDH LGVEISDAMA SLDRRRHNGD RAADQISRGW KERLESAGFE  420
DARLSSRTVS QAKLLLKMKS GGCGGGGFRV IEAGDGKAMA LGWRDRALIT ASAWRPCRRS  480
VGKNEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-35GRAS family protein