PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG045330.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 448aa MW: 48634.8 Da PI: 8.9071

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG045330.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	55.3	1.8e-17	62	149	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt+ + L++a+ ++ e+l+rg+l++ +We+v++++ + +s +qCk+k++nl+kryk + ++ + s s+s +p+++q+e TRIDC2BG045330.1 62 EWTDGAISSLLDAYMDRFEQLNRGNLRGRDWEDVAAAVtdgqGKSSGGKSVEQCKNKIDNLKKRYKVECQRIAG--SASVSLWPWYKQME 149 5***********************************6655344446899***********88888877..578889*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
REEGNHSSDR GKASHHTKRR RDRPEEFSDG GEYCSYISGG SGGGRKGRGG GVSSDYRKDR 60 EEWTDGAISS LLDAYMDRFE QLNRGNLRGR DWEDVAAAVT DGQGKSSGGK SVEQCKNKID 120 NLKKRYKVEC QRIAGSASVS LWPWYKQMEQ IMGNSPSPGT PKPPPATNDE KPRQQQQHSN 180 KRYPSSGTGH ATTMVPYSRS TPLSNPKWKR VLLKIGGTAL AGEAPHNVDP KVIMLIAREV 240 QVACRHGVEV AILMGGRNVF CADSWVAATG TDRASTHPIG MMAAVMNAVL LQASLEKIGV 300 ETRVQTALMM QEVAEPYIRR RAIRHLEKGR VVIFGGTGAG TGNPLFTTDT AAALRASEIN 360 ADVVLKGVIG DDEYGCPPRS NGSAPFEHIS FRELAARGTS KMDMTAITCC EENNIPVVIF 420 NMLEPGNMSR AICGDQVGTL VDQSGRIT

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

REEGNHSSDR GKASHHTKRR RDRPEEFSDG GEYCSYISGG SGGGRKGRGG GVSSDYRKDR  60
EEWTDGAISS LLDAYMDRFE QLNRGNLRGR DWEDVAAAVT DGQGKSSGGK SVEQCKNKID  120
NLKKRYKVEC QRIAGSASVS LWPWYKQMEQ IMGNSPSPGT PKPPPATNDE KPRQQQQHSN  180
KRYPSSGTGH ATTMVPYSRS TPLSNPKWKR VLLKIGGTAL AGEAPHNVDP KVIMLIAREV  240
QVACRHGVEV AILMGGRNVF CADSWVAATG TDRASTHPIG MMAAVMNAVL LQASLEKIGV  300
ETRVQTALMM QEVAEPYIRR RAIRHLEKGR VVIFGGTGAG TGNPLFTTDT AAALRASEIN  360
ADVVLKGVIG DDEYGCPPRS NGSAPFEHIS FRELAARGTS KMDMTAITCC EENNIPVVIF  420
NMLEPGNMSR AICGDQVGTL VDQSGRIT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	42	51	GGGRKGRGGG
2	43	52	GGGRKGRGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	1e-151	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG045330.1