PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG044860.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 263aa    MW: 27835.2 Da    PI: 4.4149
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG044860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-184292155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++y GVr+++ +gr++AeIrdp +   + r++lg+f+taeeAa a+++a+++l+g
  TRIDC2BG044860.1 42 TRYLGVRRRP-WGRYAAEIRDPAT---KDRHWLGTFDTAEEAAVAYDRAARSLRG 92
                      5799******.**********843...4*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
KMNFSSYFFS SSSSSSSSSD KKSSSSKRRQ QAAQQQPDSN PTRYLGVRRR PWGRYAAEIR  60
DPATKDRHWL GTFDTAEEAA VAYDRAARSL RGVRARTNFA YPDLPPGSSI TPYLSPDLTS  120
DDNAVQLLQP FYADPVAPLP THQPSAGGGG QDVGSEYLYG GAPDMSSLMD DIAMPDDLPM  180
IDGGGDMDFS MYGVGGNGAN ASGGGGWCDA SELGAYSSTP GGGHGVYFEE GYVHSPLFSP  240
MPAADDAGAD GFQLGGSSSS YYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.18e-31ERF family protein