PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG043690.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 343aa MW: 37100.2 Da PI: 5.2969

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG043690.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.1	9.9e-11	141	185	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er+RR r+++++ eLr l+P+ +K++Ka+i Av Y+k+Lq TRIDC2BG043690.1 141 IVSERKRRFRMKEKLYELRALVPNI-----TKMDKASIIADAVAYVKNLQ 185 568*******************7.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MEHHQRLLHL SPHQEHLMIG PGFFDVDPMH FHGDDGGFAV QPAAAVVDDG AWMEDLMHLG 60 DELFGGGGGG GGAGDDNDMV GAAADQEWRQ ECEGASPDDH PCSYDDVISP VSGEQGAGFE 120 PSRDDSDLSG TRKRRDRSKT IVSERKRRFR MKEKLYELRA LVPNITKMDK ASIIADAVAY 180 VKNLQSHARK LKEDVATLEA RPGLAGRRQQ QQQQQKQGRR QGQHGRNGGD DEGNSGSSRG 240 GGGARVTLVS AAQVGEGRFF VTVECERRDG VAAPLCAAVE SLAGFLVESS NLGCSSDRVV 300 STLTLKVSEA REEVMISDRT VKLWVMAALL SEGFRPEATS EIC

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MEHHQRLLHL SPHQEHLMIG PGFFDVDPMH FHGDDGGFAV QPAAAVVDDG AWMEDLMHLG  60
DELFGGGGGG GGAGDDNDMV GAAADQEWRQ ECEGASPDDH PCSYDDVISP VSGEQGAGFE  120
PSRDDSDLSG TRKRRDRSKT IVSERKRRFR MKEKLYELRA LVPNITKMDK ASIIADAVAY  180
VKNLQSHARK LKEDVATLEA RPGLAGRRQQ QQQQQKQGRR QGQHGRNGGD DEGNSGSSRG  240
GGGARVTLVS AAQVGEGRFF VTVECERRDG VAAPLCAAVE SLAGFLVESS NLGCSSDRVV  300
STLTLKVSEA REEVMISDRT VKLWVMAALL SEGFRPEATS EIC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	148	RKRRDRSKTIVSERKRR
2	133	149	RKRRDRSKTIVSERKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28160.1	1e-37	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG043690.1