PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG042830.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 266aa    MW: 28365.9 Da    PI: 8.6826
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG042830.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.5e-10133180455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i +++  L++l+P++    +k   Ka +L + ++Y++sLq
  TRIDC2BG042830.3 133 SHSLAERVRREKIGERMKLLQSLVPSC----NKITGKALMLDEIINYVQSLQ 180
                       8**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
TGRLSRVSSS KSLVGNTSGV AATAPLDQSA QLEMSPETDS QPATAVQDPP TKKGAAGSAR  60
KRKAAPAKGK AKASLPAVQP SCSMAAINTS PPKRPRVADG SNDENPGAVE EEKAEPAKDY  120
IHVRARRGQA TDSHSLAERV RREKIGERMK LLQSLVPSCN KITGKALMLD EIINYVQSLQ  180
RQVEFLSMKL STMNPQLELD EQQIPSKEMA VPGFSYAGSP VAVAAGHSHG AELEGTFSWE  240
QDLQSMVQMG GASSSHRQDP QAFYGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23690.12e-50bHLH family protein