PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2BG042120.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 255aa MW: 28023.7 Da PI: 4.753 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.4 | 1.3e-13 | 75 | 119 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +Er RR+++N+++ +Lr+++P+ +K++Ka+i + A+eYI++Lq TRIDC2BG042120.5 75 ILMERDRRRKLNEKLYTLRSVVPNI-----TKMDKASIIKDAIEYIQQLQ 119 579*********************7.....7******************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 255 aa Download sequence |
MDPDMGENFA YYWETQRYLE SEELVDSIFV GATEDAISYY DSSSPDGSHS SSTPMGSALP 60 GAGMGMDGTG ANKNILMERD RRRKLNEKLY TLRSVVPNIT KMDKASIIKD AIEYIQQLQA 120 EERQMEAEVS ALESATGAED DYDGGLSVDQ VSSAQRKKVK RALSVSSMND ALLAAAATVA 180 SPPVEVLELR VSEVSEKVLV VSVTCSKQRD AMTKVCRALE ELRLRVITAN ITSVSGCLMH 240 TLFVEVRRRR PPQLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G57150.2 | 2e-40 | bHLH family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2BG042120.5 |