PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG040260.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 358aa MW: 38433.1 Da PI: 6.9488

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG040260.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.1	7.1e-32	235	290	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH++Fv a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ TRIDC2BG040260.1 235 KARRCWSPELHRQFVTALHQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 290 68****************************************************97 PP
2	Myb_DNA-binding	45.1	2.3e-14	237	288	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v a +qlGg+ t+k I + m g+t ++ks++qky+ TRIDC2BG040260.1 237 RRCWSPELHRQFVTALHQLGGPqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 288 568************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MGLDVGEIGM GADLSLDLKM FAAKSLGRVR EAPAAAMDDC IRRLEEEKSK IEVFRRELPL 60 CARLLADVID VMKKEVEEKK RGGDRGEDKE DAGAGDKSNW MSTAQLWTGD SVPGDDASEK 120 QGERRRSSEP ESRDGAALPF KAVGSGAPAF APPSLRKDDK AVGMPDLPFL SPAPIKTSPA 180 AATGGAEESR RQLVGFEQEA ARAAAALAPA APSLSLQAQS QQTAQQQQQQ QQARKARRCW 240 SPELHRQFVT ALHQLGGPQV ATPKQIRELM KVDGLTNDEV KSHLQKYRLH NRRAPGSPAA 300 NRPIVLMGGL WITQEQSSSQ SGGSPPGPLN FSSSGVAASS VTVSGEEEDG RSESYGWK

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MGLDVGEIGM GADLSLDLKM FAAKSLGRVR EAPAAAMDDC IRRLEEEKSK IEVFRRELPL  60
CARLLADVID VMKKEVEEKK RGGDRGEDKE DAGAGDKSNW MSTAQLWTGD SVPGDDASEK  120
QGERRRSSEP ESRDGAALPF KAVGSGAPAF APPSLRKDDK AVGMPDLPFL SPAPIKTSPA  180
AATGGAEESR RQLVGFEQEA ARAAAALAPA APSLSLQAQS QQTAQQQQQQ QQARKARRCW  240
SPELHRQFVT ALHQLGGPQV ATPKQIRELM KVDGLTNDEV KSHLQKYRLH NRRAPGSPAA  300
NRPIVLMGGL WITQEQSSSQ SGGSPPGPLN FSSSGVAASS VTVSGEEEDG RSESYGWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	4e-31	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG040260.1