PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG039540.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 234aa    MW: 26049.6 Da    PI: 7.9246
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG039540.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.35.9e-184490455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       hn+ Er+RRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIDC2BG039540.3 44 VHNQSERKRRDRINEKMKALQELVPHC-----NKSDKASILDEAIEYLKSLQ 90
                      6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
QALLSKRGRD ELGSRREDAD DCEAVNETRP QRPAAKRRTR AAEVHNQSER KRRDRINEKM  60
KALQELVPHC NKSDKASILD EAIEYLKSLQ LQVQIMWMTT GMAPMMYPGA HQLMPPMAMG  120
LNSACMPATQ SLSQLQRIAP FMNHHLPNQM PRVQSPAIDS LNVGNQMQNN GVCGEPRNPF  180
LHPDDTLTAA SQLPDMFPYA SQKAQQNQNH QLLPNTDMPA SGPCPPSFAD GTGT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13653KRRTRAAEVHNQSERKRR
24954ERKRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59060.15e-34bHLH family protein