PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG038180.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 366aa MW: 39063.3 Da PI: 9.7393

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG038180.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.8	2.2e-39	2	139	4	131
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssasec...eaesssssas.nsss 87 +kdrhsk++T++g RdRRvRls+ +a++f+dLqd+LG+d++sk++eWL+++a +ai++l+++ ++ +as++ +++ss a+ +s+ TRIDC2BG038180.1 2 GKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGYDQPSKAVEWLIKAAAAAIDKLPELdaaafPNHPASASasaNKQSSALHAEaDDSQ 94 79**********************************************************8888833333333323333333333313444 PP TCP 88 gkaaksaakskksqksaasalnlak.esrakarararertrekmr 131 +++ + + +s+ s++s+ s+l+l++ +sr kar+rar+r+++ + TRIDC2BG038180.1 95 PQQLTRSGCSSTSETSKGSVLSLSRsDSRVKARERARDRSASVKD 139 48888888****************************9887655 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
GGKDRHSKVY TAKGIRDRRV RLSVATAIQF YDLQDRLGYD QPSKAVEWLI KAAAAAIDKL 60 PELDAAAFPN HPASASASAN KQSSALHAEA DDSQPQQLTR SGCSSTSETS KGSVLSLSRS 120 DSRVKARERA RDRSASVKDK DDSVTAAVHR RPPSAQAASF TELLTGLAAA TPAVAQHKQH 180 NSWQQMTASA TADYLGFAQP RKSGHGMLHT FASPAPHLGN IAPVAMAPAQ HFSLSAGGGD 240 SQTEMPHFSF SQDHYMPVHA APASGPAVDY SLNFSMSSGL VGVNNTRGTL QSNSQPHLSG 300 HHHHHQQQQQ LQRLSTPLDA PHIPFLFSPA VAVASPTTAE SHFGAAAALQ LWEGFRHSDM 360 KEKGKN

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

GGKDRHSKVY TAKGIRDRRV RLSVATAIQF YDLQDRLGYD QPSKAVEWLI KAAAAAIDKL  60
PELDAAAFPN HPASASASAN KQSSALHAEA DDSQPQQLTR SGCSSTSETS KGSVLSLSRS  120
DSRVKARERA RDRSASVKDK DDSVTAAVHR RPPSAQAASF TELLTGLAAA TPAVAQHKQH  180
NSWQQMTASA TADYLGFAQP RKSGHGMLHT FASPAPHLGN IAPVAMAPAQ HFSLSAGGGD  240
SQTEMPHFSF SQDHYMPVHA APASGPAVDY SLNFSMSSGL VGVNNTRGTL QSNSQPHLSG  300
HHHHHQQQQQ LQRLSTPLDA PHIPFLFSPA VAVASPTTAE SHFGAAAALQ LWEGFRHSDM  360
KEKGKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	1e-33	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG038180.1