PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG035380.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 884aa    MW: 97416.3 Da    PI: 7.4775
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG035380.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.72.9e-21107208190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerr............traetrtgCkaklkvkkek.dgkw 76 
                       +fY+ YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk     +                 + + +rtgC a+l++k+    + +
  TRIDC2BG035380.9 107 EFYKVYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetN----AtdvtvaapppppRCPDSRTGCLASLTIKLLPsANAF 194
                       6*****************99997666.****************999955550....24455556666668899*************99899** PP

              FAR1  77 evtkleleHnHela 90 
                       +vt+++ eHnH+la
  TRIDC2BG035380.9 195 RVTEFVAEHNHPLA 208
                       ************97 PP
2FAR169.96.2e-22256355290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                       fYn+YA++vGFsvr+s++k++  +g i++r fvCs+eg +++ k++               + r   + trtgC+a++++k +   +++v+k+
  TRIDC2BG035380.9 256 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasistnagggaPGTPRPGPPPTRTGCQARMVIKITPCRTYRVAKF 346
                       9*************9976655..9******************9999******99999977777778899************************ PP

              FAR1  82 eleHnHela 90 
                         eHnH+la
  TRIDC2BG035380.9 347 IAEHNHPLA 355
                       *******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 884 aa     Download sequence    
TAAASTANPS NLFFLLPLLP PSFLQTLAQT LMSTTAHPPA SLSGDSSPTT SGSSSPSSSA  60
FVAGSDEPAL LGPATSTSTP SAAGDDAAVP SSPQMGMYFE TEDDAYEFYK VYAARLGFVV  120
RKSNKSKNSR HTVTRRLFVC SKQGFRQEPK KPQDETNATD VTVAAPPPPP RCPDSRTGCL  180
ASLTIKLLPS ANAFRVTEFV AEHNHPLASA VSAVSLAMIP SSSSHHTIAA AASLPDPRDG  240
PLPEMHFETE DDAYAFYNRY AEHVGFSVRR SYKKRKHGVI VSRIFVCSRE GVSDRAKHDG  300
LASISTNAGG GAPGTPRPGP PPTRTGCQAR MVIKITPCRT YRVAKFIAEH NHPLANSETV  360
HKLRSHKMRA RGHELGAGEL HRRKQGKGVQ LGDAGAALEY LEGLQVGNPS LYYAVGMAPD  420
GNSAVNFFWA DAKSIIDFRS FGDVVCFDTT YGLNVYGRPF ALFVGVDNHK QLLVFGAALL  480
YDDGIQSLKW VFQAFADAMR DRQPKTILID ERSECAIAAA EVWPGSNHCT SVWHIYHSSK  540
RHLKQVFESS KSFGNALSQC LFDCEDEMEF LSAWEKLIEK HDIGESEWLS RLFLEKEKWA  600
LPYRRTVFSA DILSTLRKDS MINELKRELS EQEDILLFFK RYETMLEEHR SKKLQADVDG  660
NQVTLPIPSL RMLKQSSNAY TPEAFKMFQG EFEAYMNCMS FPCSAVGTVS EYKITLDEKP  720
SEGIVKFDAL DGLATCSCRK FESVGIQCCH VLKVLDLKNI KELPEQYILK RWRKDARSVR  780
MGEEPNCGSS SIMRSSLDVR FSNMCRMVSL IASRAAKSEE AMSYIESQSS VLLKHLDEIL  840
QTGYPENGNH DVASSSQAIS FVGNHPDHTT QARAVAHTAN GIMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-84FAR1 family protein