PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG035380.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 911aa    MW: 100086 Da    PI: 7.4779
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG035380.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.73e-21111212190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerr............traetrtgCkaklkvkkek.dgkw 76 
                       +fY+ YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk     +                 + + +rtgC a+l++k+    + +
  TRIDC2BG035380.7 111 EFYKVYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetN----AtdvtvaapppppRCPDSRTGCLASLTIKLLPsANAF 198
                       6*****************99997666.****************999955550....24455556666668899*************99899** PP

              FAR1  77 evtkleleHnHela 90 
                       +vt+++ eHnH+la
  TRIDC2BG035380.7 199 RVTEFVAEHNHPLA 212
                       ************97 PP
2FAR169.86.4e-22260359290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                       fYn+YA++vGFsvr+s++k++  +g i++r fvCs+eg +++ k++               + r   + trtgC+a++++k +   +++v+k+
  TRIDC2BG035380.7 260 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasistnagggaPGTPRPGPPPTRTGCQARMVIKITPCRTYRVAKF 350
                       9*************9976655..9******************9999******99999977777778899************************ PP

              FAR1  82 eleHnHela 90 
                         eHnH+la
  TRIDC2BG035380.7 351 IAEHNHPLA 359
                       *******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 911 aa     Download sequence    
THLPTAAAST ANPSNLFFLL PLLPPSFLQT LAQTLMSTTA HPPASLSGDS SPTTSGSSSP  60
SSSAFVAGSD EPALLGPATS TSTPSAAGDD AAVPSSPQMG MYFETEDDAY EFYKVYAARL  120
GFVVRKSNKS KNSRHTVTRR LFVCSKQGFR QEPKKPQDET NATDVTVAAP PPPPRCPDSR  180
TGCLASLTIK LLPSANAFRV TEFVAEHNHP LASAVSAVSL AMIPSSSSHH TIAAAASLPD  240
PRDGPLPEMH FETEDDAYAF YNRYAEHVGF SVRRSYKKRK HGVIVSRIFV CSREGVSDRA  300
KHDGLASIST NAGGGAPGTP RPGPPPTRTG CQARMVIKIT PCRTYRVAKF IAEHNHPLAN  360
SETVHKLRSH KMRARGHELG AGELHRRKQG KGVQLGDAGA ALEYLEGLQV GNPSLYYAVG  420
MAPDGNSAVN FFWADAKSII DFRSFGDVVC FDTTYGLNVY GRPFALFVGV DNHKQLLVFG  480
AALLYDDGIQ SLKWVFQAFA DAMRDRQPKT ILIDERSECA IAAAEVWPGS NHCTSVWHIY  540
HSSKRHLKQV FESSKSFGNA LSQCLFDCED EMEFLSAWEK LIEKHDIGES EWLSRLFLEK  600
EKWALPYRRT VFSADILSTL RKDSMINELK RELSEQEDIL LFFKRYETML EEHRSKKLQA  660
DVDGNQVTLP IPSLRMLKQS SNAYTPEAFK MFQGEFEAYM NCMSFPCSAV GTVSEYKITL  720
DEKPSEGIVK FDALDGLATC SCRKFESVGI QCCHVLKVLD LKNIKELPEQ YILKRWRKDA  780
RSVRMGEEPN CGSSSIMRSS LDVRFSNMCR MVSLIASRAA KSEEAMSYIE SQSSVLLKHL  840
DEILQTGYPE NGNHDVASSS QAISFVGNHP DHTTQARAVA HTANGLTSLL GISAYPESSG  900
QLKGSVGSLY C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-83FAR1 family protein