PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG035380.26

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 644aa MW: 71836.8 Da PI: 8.1166

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG035380.26	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.6	1.5e-16	1	92	10	90
FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 vGFsvr+s++k++ +g i++r fvCs+eg +++ k++ + r + trtgC+a++++k + +++v+k+ eHnH+la TRIDC2BG035380.26 1 VGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasistnagggaPGTPRPGPPPTRTGCQARMVIKITPCRTYRVAKFIAEHNHPLA 92 7***9876655..9**************9999**99999977777778899*****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 644 aa Download sequence
VGFSVRRSYK KRKHGVIVSR IFVCSREGVS DRAKHDGLAS ISTNAGGGAP GTPRPGPPPT 60 RTGCQARMVI KITPCRTYRV AKFIAEHNHP LANSETVHKL RSHKMRARGH ELGAGELHRR 120 KQGKGVQLGD AGAALEYLEG LQVGNPSLYY AVGMAPDGNS AVNFFWADAK SIIDFRSFGD 180 VVCFDTTYGL NVYGRPFALF VGVDNHKQLL VFGAALLYDD GIQSLKWVFQ AFADAMRDRQ 240 PKTILIDERS ECAIAAAEVW PGSNHCTSVW HIYHSSKRHL KQVFESSKSF GNALSQCLFD 300 CEDEMEFLSA WEKLIEKHDI GESEWLSRLF LEKEKWALPY RRTVFSADIL STLRKDSMIN 360 ELKRELSEQE DILLFFKRYE TMLEEHRSKK LQADVDGNQV TLPIPSLRML KQSSNAYTPE 420 AFKMFQGEFE AYMNCMSFPC SAVGTVSEYK ITLDEKPSEG IVKFDALDGL ATCSCRKFES 480 VGIQCCHVLK VLDLKNIKEL PEQYILKRWR KDARSVRMGE EPNCGSSSIM RSSLDVRFSN 540 MCRMVSLIAS RAAKSEEAMS YIESQSSVLL KHLDEILQTG YPENGNHDVA SSSQAISFVG 600 NHPDHTTQAR AVAHTANGLT SLLGISAYPE SSGQLKGSVG SLYC

Sequence ? help Back to Top

Protein Sequence Length: 644 aa Download sequence

VGFSVRRSYK KRKHGVIVSR IFVCSREGVS DRAKHDGLAS ISTNAGGGAP GTPRPGPPPT  60
RTGCQARMVI KITPCRTYRV AKFIAEHNHP LANSETVHKL RSHKMRARGH ELGAGELHRR  120
KQGKGVQLGD AGAALEYLEG LQVGNPSLYY AVGMAPDGNS AVNFFWADAK SIIDFRSFGD  180
VVCFDTTYGL NVYGRPFALF VGVDNHKQLL VFGAALLYDD GIQSLKWVFQ AFADAMRDRQ  240
PKTILIDERS ECAIAAAEVW PGSNHCTSVW HIYHSSKRHL KQVFESSKSF GNALSQCLFD  300
CEDEMEFLSA WEKLIEKHDI GESEWLSRLF LEKEKWALPY RRTVFSADIL STLRKDSMIN  360
ELKRELSEQE DILLFFKRYE TMLEEHRSKK LQADVDGNQV TLPIPSLRML KQSSNAYTPE  420
AFKMFQGEFE AYMNCMSFPC SAVGTVSEYK ITLDEKPSEG IVKFDALDGL ATCSCRKFES  480
VGIQCCHVLK VLDLKNIKEL PEQYILKRWR KDARSVRMGE EPNCGSSSIM RSSLDVRFSN  540
MCRMVSLIAS RAAKSEEAMS YIESQSSVLL KHLDEILQTG YPENGNHDVA SSSQAISFVG  600
NHPDHTTQAR AVAHTANGLT SLLGISAYPE SSGQLKGSVG SLYC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-79	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG035380.26