PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG035380.18
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 902aa    MW: 99236.4 Da    PI: 7.4682
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG035380.18genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.73e-21102203190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerr............traetrtgCkaklkvkkek.dgk 75 
                        +fY+ YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk     +                 + + +rtgC a+l++k+    + 
  TRIDC2BG035380.18 102 EFYKVYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetN----AtdvtvaapppppRCPDSRTGCLASLTIKLLPsANA 188
                        6*****************99997666.****************999955550....24455556666668899*************99899* PP

               FAR1  76 wevtkleleHnHela 90 
                        ++vt+++ eHnH+la
  TRIDC2BG035380.18 189 FRVTEFVAEHNHPLA 203
                        *************97 PP
2FAR169.86.3e-22251350290
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtk 80 
                        fYn+YA++vGFsvr+s++k++  +g i++r fvCs+eg +++ k++               + r   + trtgC+a++++k +   +++v+k
  TRIDC2BG035380.18 251 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasistnagggaPGTPRPGPPPTRTGCQARMVIKITPCRTYRVAK 340
                        9*************9976655..9******************9999******99999977777778899*********************** PP

               FAR1  81 leleHnHela 90 
                        +  eHnH+la
  TRIDC2BG035380.18 341 FIAEHNHPLA 350
                        ********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 902 aa     Download sequence    
TANPSNLFFL LPLLPPSFLQ TLAQTLMSTT AHPPASLSGD SSPTTSGSSS PSSSAFVAGS  60
DEPALLGPAT STSTPSAAGD DAAVPSSPQM GMYFETEDDA YEFYKVYAAR LGFVVRKSNK  120
SKNSRHTVTR RLFVCSKQGF RQEPKKPQDE TNATDVTVAA PPPPPRCPDS RTGCLASLTI  180
KLLPSANAFR VTEFVAEHNH PLASAVSAVS LAMIPSSSSH HTIAAAASLP DPRDGPLPEM  240
HFETEDDAYA FYNRYAEHVG FSVRRSYKKR KHGVIVSRIF VCSREGVSDR AKHDGLASIS  300
TNAGGGAPGT PRPGPPPTRT GCQARMVIKI TPCRTYRVAK FIAEHNHPLA NSETVHKLRS  360
HKMRARGHEL GAGELHRRKQ GKGVQLGDAG AALEYLEGLQ VGNPSLYYAV GMAPDGNSAV  420
NFFWADAKSI IDFRSFGDVV CFDTTYGLNV YGRPFALFVG VDNHKQLLVF GAALLYDDGI  480
QSLKWVFQAF ADAMRDRQPK TILIDERSEC AIAAAEVWPG SNHCTSVWHI YHSSKRHLKQ  540
VFESSKSFGN ALSQCLFDCE DEMEFLSAWE KLIEKHDIGE SEWLSRLFLE KEKWALPYRR  600
TVFSADILST LRKDSMINEL KRELSEQEDI LLFFKRYETM LEEHRSKKLQ ADVDGNQVTL  660
PIPSLRMLKQ SSNAYTPEAF KMFQGEFEAY MNCMSFPCSA VGTVSEYKIT LDEKPSEGIV  720
KFDALDGLAT CSCRKFESVG IQCCHVLKVL DLKNIKELPE QYILKRWRKD ARSVRMGEEP  780
NCGSSSIMRS SLDVRFSNMC RMVSLIASRA AKSEEAMSYI ESQSSVLLKH LDEILQTGYP  840
ENGNHDVASS SQAISFVGNH PDHTTQARAV AHTANGLTSL LGISAYPESS GQLKGSVGSL  900
YC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-83FAR1 family protein