PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG035380.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 907aa    MW: 99637.8 Da    PI: 7.4682
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG035380.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.73e-21107208190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerr............traetrtgCkaklkvkkek.dgk 75 
                        +fY+ YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk     +                 + + +rtgC a+l++k+    + 
  TRIDC2BG035380.11 107 EFYKVYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetN----AtdvtvaapppppRCPDSRTGCLASLTIKLLPsANA 193
                        6*****************99997666.****************999955550....24455556666668899*************99899* PP

               FAR1  76 wevtkleleHnHela 90 
                        ++vt+++ eHnH+la
  TRIDC2BG035380.11 194 FRVTEFVAEHNHPLA 208
                        *************97 PP
2FAR169.86.4e-22256355290
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtk 80 
                        fYn+YA++vGFsvr+s++k++  +g i++r fvCs+eg +++ k++               + r   + trtgC+a++++k +   +++v+k
  TRIDC2BG035380.11 256 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasistnagggaPGTPRPGPPPTRTGCQARMVIKITPCRTYRVAK 345
                        9*************9976655..9******************9999******99999977777778899*********************** PP

               FAR1  81 leleHnHela 90 
                        +  eHnH+la
  TRIDC2BG035380.11 346 FIAEHNHPLA 355
                        ********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 907 aa     Download sequence    
TAAASTANPS NLFFLLPLLP PSFLQTLAQT LMSTTAHPPA SLSGDSSPTT SGSSSPSSSA  60
FVAGSDEPAL LGPATSTSTP SAAGDDAAVP SSPQMGMYFE TEDDAYEFYK VYAARLGFVV  120
RKSNKSKNSR HTVTRRLFVC SKQGFRQEPK KPQDETNATD VTVAAPPPPP RCPDSRTGCL  180
ASLTIKLLPS ANAFRVTEFV AEHNHPLASA VSAVSLAMIP SSSSHHTIAA AASLPDPRDG  240
PLPEMHFETE DDAYAFYNRY AEHVGFSVRR SYKKRKHGVI VSRIFVCSRE GVSDRAKHDG  300
LASISTNAGG GAPGTPRPGP PPTRTGCQAR MVIKITPCRT YRVAKFIAEH NHPLANSETV  360
HKLRSHKMRA RGHELGAGEL HRRKQGKGVQ LGDAGAALEY LEGLQVGNPS LYYAVGMAPD  420
GNSAVNFFWA DAKSIIDFRS FGDVVCFDTT YGLNVYGRPF ALFVGVDNHK QLLVFGAALL  480
YDDGIQSLKW VFQAFADAMR DRQPKTILID ERSECAIAAA EVWPGSNHCT SVWHIYHSSK  540
RHLKQVFESS KSFGNALSQC LFDCEDEMEF LSAWEKLIEK HDIGESEWLS RLFLEKEKWA  600
LPYRRTVFSA DILSTLRKDS MINELKRELS EQEDILLFFK RYETMLEEHR SKKLQADVDG  660
NQVTLPIPSL RMLKQSSNAY TPEAFKMFQG EFEAYMNCMS FPCSAVGTVS EYKITLDEKP  720
SEGIVKFDAL DGLATCSCRK FESVGIQCCH VLKVLDLKNI KELPEQYILK RWRKDARSVR  780
MGEEPNCGSS SIMRSSLDVR FSNMCRMVSL IASRAAKSEE AMSYIESQSS VLLKHLDEIL  840
QTGYPENGNH DVASSSQAIS FVGNHPDHTT QARAVAHTAN GLTSLLGISA YPESSGQLKG  900
SVGSLYC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-83FAR1 family protein