PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG034590.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 210aa MW: 23116.4 Da PI: 9.4383

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG034590.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	71.8	8.1e-23	121	161	1	41
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrk 41 ++epgrCrRtDGKkWRC+r++++++k+CErH+hrgr+r + TRIDC2BG034590.4 121 EPEPGRCRRTDGKKWRCWRKTIPNEKYCERHMHRGRKRPVQ 161 69***********************************9765 PP
2	QLQ	54.6	3.2e-19	55	90	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Qlq+L++Q +y+y+aa++PvP +L+++i+k TRIDC2BG034590.4 55 SFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPIWK 90 8*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
PLHCTLTYTL ARNCMFSGFR YKSDVGFIKH AVATAALQEE MRALLASVPE GAGASFTAMQ 60 LQELEQQSRV YQYMAARVPV PTHLVFPIWK SVTGASSEGA QNYPTLMGLA TLCLDFGKSP 120 EPEPGRCRRT DGKKWRCWRK TIPNEKYCER HMHRGRKRPV QVIVEDDEPD SASGSKSSSG 180 KVTEGGKKTD DKSSSSKKLA VAAPAAVEFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	7e-31	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG034590.4