PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG030960.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 489aa    MW: 53738.4 Da    PI: 5.9174
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG030960.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1101.7e-34711632103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y+++++++l+ +isw   gnsfvv++++ fa++vLp+ Fkh+nf+SFvRQLn+YgF+kv+ ++         weF+h+ F +g+k+ll
  TRIDC2BG030960.5  71 FLSKTYDLVSEPQLDGVISWGPAGNSFVVWNPSAFARDVLPHNFKHNNFSSFVRQLNTYGFRKVHADR---------WEFAHEGFLRGSKHLL 154
                       9****************************************************************999.........**************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                       ++i r++s+
  TRIDC2BG030960.5 155 KTIVRRRSS 163
                       *****9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    
TTPAAVTASA SASMDAALLL EPKLEMLQQH PAGHYAALDH HLIPPPPALV VPCEPPRLLE  60
ALLQGPQLPP FLSKTYDLVS EPQLDGVISW GPAGNSFVVW NPSAFARDVL PHNFKHNNFS  120
SFVRQLNTYG FRKVHADRWE FAHEGFLRGS KHLLKTIVRR RSSPTQQSSP QPGSSIFRKI  180
QSSSCGESTL DPELRSLRRE KNALLQEVAR LKEEHNQTIE HMNALNQRLE SAEDRQKQVV  240
SFLAKLLQNP DFLRQLKMHR GRRDGIDSSR VKRKFLKHVP HGSRDSGDSS LPRTAESTCS  300
PAHPVAHDAI ADLQSFLLED TDLSDGMLPG SFGLDGVEAS EDIGALVQVF DQQDFGTGAE  360
LLEIPPVSAA AHCQDSTFGR SKGKNVMCSG GTDGTSSQAN CLVSLPGNVC KLMDADGEQI  420
WGADTFFQSS CSGTSQQAYV SDPYLMEIPD KPERFWELDL EALDDGDLHL DKCVIGDPAL  480
EQQRGNMKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.11e-67HSF family protein