PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG030940.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 801aa MW: 89147.3 Da PI: 7.908

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG030940.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.1	1.6e-18	297	396	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d sg++W +++++ +++s++yvl+ G ++ +L++gD+v F++++ e TRIDC2BG030940.5 297 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDASGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMHLQAGDTVSFSRID-PE 387 89************************555566778***********99899999999.*******************987.67 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++lv+++++ TRIDC2BG030940.5 388 GKLVMGFRK 396 767777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 801 aa Download sequence
FMRRMSLLGV EAPSQMWSTP TVHMSQNVAD RKDSYVKSWR PPTGQISSQW RQNHQLWNMS 60 TIQADLQQRL AYEFDRPSGS EKLPPGRTFI HAQEKKSDDM HDRPTTPAGM GQIIRDRYAN 120 GLGQQTSMDP THSSTPYQRE GPNPNSLHDP SHHVGESDPL SSRKGIISDG GSTVSTGFKL 180 DPHHPSILKD DAASTLPTMG GYTITNYPPV PGRSDHLRII PNNPQQPPTT VPLSVVQKQF 240 YSHSVIEPNY QAQFRNGKPR MDPKARSELL PRYWPRITDK ELQHLSGDSN SVITPLFEKM 300 LSASDAGRIG RLVLPKKCAE AYFPPISQPE GLPLKVQDAS GKEWVFQFRF WPNNNSRMYV 360 LEGVTPCIQS MHLQAGDTVS FSRIDPEGKL VMGFRKTKTQ EQIFRQEEPT KPANAAPNLP 420 DVNVNVTAPD SSPNSSLVRP NKVNTENKDS SPVEQAASKI DKGGVAQKEG SGTVRTSPGP 480 VKRKATSIGP KIKRFRIDNE ESMELKITWE EAQELLRPPL KAPSVVIVDG HEFEEYEEPP 540 VLGRKTYFVT DQSGENHQWA QCEDCSKWRK LPVDALLPSK WTCSDNKWDP ERTTCVSPQE 600 ASMEELAELI PIKAGAAKKA KLRMDTDSID VSDGLDTLAN LAILGEGESL PSQPTTKHPR 660 HRPGCSCIVC IQPPSGKGPK HKQTCTCNVC MTVRRRFRTL MLRREKRASE KESDELPRKK 720 EQGQSSESIP QDPLPASTSP SSTPQKVSGN GDDAEEAMEH TMASSPMKNQ IDLNIQPERE 780 DEQSPKSDAV GAMRLPRENA A

Sequence ? help Back to Top

Protein Sequence Length: 801 aa Download sequence

FMRRMSLLGV EAPSQMWSTP TVHMSQNVAD RKDSYVKSWR PPTGQISSQW RQNHQLWNMS  60
TIQADLQQRL AYEFDRPSGS EKLPPGRTFI HAQEKKSDDM HDRPTTPAGM GQIIRDRYAN  120
GLGQQTSMDP THSSTPYQRE GPNPNSLHDP SHHVGESDPL SSRKGIISDG GSTVSTGFKL  180
DPHHPSILKD DAASTLPTMG GYTITNYPPV PGRSDHLRII PNNPQQPPTT VPLSVVQKQF  240
YSHSVIEPNY QAQFRNGKPR MDPKARSELL PRYWPRITDK ELQHLSGDSN SVITPLFEKM  300
LSASDAGRIG RLVLPKKCAE AYFPPISQPE GLPLKVQDAS GKEWVFQFRF WPNNNSRMYV  360
LEGVTPCIQS MHLQAGDTVS FSRIDPEGKL VMGFRKTKTQ EQIFRQEEPT KPANAAPNLP  420
DVNVNVTAPD SSPNSSLVRP NKVNTENKDS SPVEQAASKI DKGGVAQKEG SGTVRTSPGP  480
VKRKATSIGP KIKRFRIDNE ESMELKITWE EAQELLRPPL KAPSVVIVDG HEFEEYEEPP  540
VLGRKTYFVT DQSGENHQWA QCEDCSKWRK LPVDALLPSK WTCSDNKWDP ERTTCVSPQE  600
ASMEELAELI PIKAGAAKKA KLRMDTDSID VSDGLDTLAN LAILGEGESL PSQPTTKHPR  660
HRPGCSCIVC IQPPSGKGPK HKQTCTCNVC MTVRRRFRTL MLRREKRASE KESDELPRKK  720
EQGQSSESIP QDPLPASTSP SSTPQKVSGN GDDAEEAMEH TMASSPMKNQ IDLNIQPERE  780
DEQSPKSDAV GAMRLPRENA A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-144	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG030940.5