PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG030350.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 449aa    MW: 49032 Da    PI: 6.8398
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG030350.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3628.3e-111694322374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lLl+cAeav+ ++l +a+ +L+++ elasp g++ +R+aayf  AL ar+++s  + y+ l+ ++ +  +s +  +a+++++ +sP++kfs
  TRIDC2BG030350.2  69 LRLLLRCAEAVAMDQLPEARDMLQEVAELASPFGSSPERVAAYFGDALCARVLSSYLGAYSPLALRPLAAAQSRRISSAFQAYNALSPLVKFS 161
                       689******************************************************************99********************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                       h+taN+aIl+a++ge++vH+iD+di+qGlQWp L++ LasRp+ p slR+Tg+g+    s + le+tg+rLa+fA++lg+pfef+++  k  +
  TRIDC2BG030350.2 162 HFTANKAILQALDGEDHVHVIDLDIMQGLQWPGLFHMLASRPRRPLSLRVTGLGA----SLDVLEATGRRLADFAASLGLPFEFQPIEGKIGH 250
                       *******************************************************....9**************************8666555 PP

              GRAS 188 dleleeL...rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                         ++ +L   r +++Ea++V++++  h l+d ++s       +++l+ksl+Pk++++veq++ h s++Fl rf+eal+yysalfd+l  ++++
  TRIDC2BG030350.2 251 VADTTALlgpRHRHREATVVHWMH--HCLYDVTGSDVG----TVRLLKSLRPKLITIVEQDLGH-SGDFLGRFVEALHYYSALFDALRDGAGA 336
                       56777775656666*********9..889988999998....**********************.899*******************9999** PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++eer+ vEr+llg ei+n+va  g +r+ + + +e+W + l++aGF+pv+l  + a+qa+ll+ +++++gy++ ee+g+l lgWkd +L+++
  TRIDC2BG030350.2 337 AEEERHAVERQLLGAEIRNIVAVGGPKRTGEVR-VERWGDELRRAGFRPVSLAGSPAAQARLLIGMYPWKGYTLAEEDGCLKLGWKDLSLLTA 428
                       ***************************998887.9********************************************************** PP

              GRAS 371 SaWr 374
                       S+W+
  TRIDC2BG030350.2 429 SSWE 432
                       ***5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MIQGVLSRAP ATDAMKAKRA ASMPDDEEKA RGKRLQLHGS ASEQGLAVAA GEEGERVVEA  60
AETRVLRLLR LLLRCAEAVA MDQLPEARDM LQEVAELASP FGSSPERVAA YFGDALCARV  120
LSSYLGAYSP LALRPLAAAQ SRRISSAFQA YNALSPLVKF SHFTANKAIL QALDGEDHVH  180
VIDLDIMQGL QWPGLFHMLA SRPRRPLSLR VTGLGASLDV LEATGRRLAD FAASLGLPFE  240
FQPIEGKIGH VADTTALLGP RHRHREATVV HWMHHCLYDV TGSDVGTVRL LKSLRPKLIT  300
IVEQDLGHSG DFLGRFVEAL HYYSALFDAL RDGAGAAEEE RHAVERQLLG AEIRNIVAVG  360
GPKRTGEVRV ERWGDELRRA GFRPVSLAGS PAAQARLLIG MYPWKGYTLA EEDGCLKLGW  420
KDLSLLTASS WEPTEDDHVA VAEQKRHDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-158GRAS family protein