PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG030000.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 288aa    MW: 31495.6 Da    PI: 8.2475
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG030000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00018261282323
                       ETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                       Cp+C+k F ++ +L+ H  + H
  TRIDC2BG030000.1 261 CPKCSKGFQDPVLLVEHVEReH 282
                       *****************99888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
AMGTPEFPDL GRHCSVGDCH QIDFLPFTCD RCDFVFCLQH RSYTSHKCPK ANNKDVTVVI  60
CPLCAKGVRL NPNEDANITW ESHVNTDCDP SNYQRATKKK KCPVPGCREQ LTFSNTIMCK  120
DCSKEHCLKH RFGPDHKCPG PRKPEPTFPF ANMLRRSQKV EPRANSSGSG SSWWSSSLLN  180
AASSFRSSAE AGMQKLSIAT SEAVQKAKDG VTPSSSGGGL VEQCVQCPAR FSTVEALIEH  240
AEKSHGNNSQ PSRGKVTIDA CPKCSKGFQD PVLLVEHVER EHGGTSKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-117C2H2 family protein