PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG028090.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 302aa    MW: 32986.5 Da    PI: 4.5722
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG028090.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.82.9e-112262661055
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR+riN+++ +L+ l+P+      +K++ +++Le+AveY+k +q
  TRIDC2BG028090.1 226 RKRRERINERLKTLQNLVPNG-----TKVDISTMLEEAVEYVKFMQ 266
                       9******************97.....8****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MESSYSSAMP METDMMSQFL GGDHHCFAYE QQDESMEAMA AMFLPGLDTD SNSSSSCLNY  60
DVSPQCWPQP QPQPGHSSSV TSFLDPAHGY ESFEFPVMDP FSHAEFQSHC TDIPYLVGGS  120
EDLSPLDSNC APAGGEEAAN DHTPVTNKRK SRAATTASKK AKKAAKKDLT SNDIEGDDTY  180
VIDPQSSSSC TSEDGDLDGN AKSGSKKTGT RASRGAATDP QSLYARKRRE RINERLKTLQ  240
NLVPNGTKVD ISTMLEEAVE YVKFMQLQIK LLSSDDMWMY APLAYNGINV SSLEMHIAAL  300
QK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27740.11e-50bHLH family protein