PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2BG027210.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 227aa MW: 24698.7 Da PI: 7.3892 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.9 | 4e-06 | 186 | 206 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C Cgk Fs++ +L H+++H TRIDC2BG027210.5 186 CRECGKLFSSWRSLFGHMKSH 206 ********************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 227 aa Download sequence |
LRSITTSASF AFRLTTPPYL SSPLLLQLSQ ASFALPQIPN GRARRLRSSP RRPLPIPTLL 60 LIDPIDIDIA ASCSVGRSIM DAVGELAAAG MHHHHHHHHR CKVCGKGFSC GRSLGGHMRS 120 HISLGEALPE ADDELMRRSS ANGGRTSANG AVGYGLRENP KKTRRLSDFA DEEEDQGGDG 180 GEQRACRECG KLFSSWRSLF GHMKSHAPGA ARDHDEYDEA DDDVDLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G26610.1 | 9e-19 | C2H2 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2BG027210.5 |