PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2BG027210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 102aa MW: 10311.3 Da PI: 4.2686 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.8 | 0.00076 | 31 | 53 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C ++F + L H r+H TRIDC2BG027210.1 31 FECPVCFRVFGSGQALGGHKRSH 53 89***************999999 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 102 aa Download sequence |
TLSPSASPDS VAIGIGAGSN KKPAAAEAEK FECPVCFRVF GSGQALGGHK RSHIIADTAF 60 SSDGELYGSA SVSVNEEQEQ GYPVAAAGSL DLNFPPAPSE EA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G60580.1 | 6e-12 | C2H2 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2BG027210.1 |