PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG026060.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 182aa    MW: 19678.2 Da    PI: 6.6727
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG026060.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB184.11.1e-5733128297
             NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 
                       +eqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfedy+eplk+yl+k+rele
  TRIDC2BG026060.4  33 KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELE 125
                       79******************************************************************************************* PP

             NF-YB  95 gek 97 
                       gek
  TRIDC2BG026060.4 126 GEK 128
                       *97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
GRSCSVSWLR RAAMPDSDND SGGPSNADFS SPKEQDRFLP IANVSRIMKK ALPANAKISK  60
DAKETVQECV SEFISFITGE ASDKCQREKR KTINGDDLLW AMTTLGFEDY MEPLKLYLHK  120
FRELEGEKAV SGEAGGYGGM YGGAGAGGGG GGMFMMMGQP MYGSPPAAGY QHPQHHHQMM  180
TG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.12e-72NF-YB family protein