PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG025410.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 676aa MW: 77828.6 Da PI: 8.1174

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG025410.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	43.4	4.8e-14	9	45	1	35
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C Cg + Tp++Rrgpdg++tLCnaCG+ yrk ++ TRIDC2BG025410.2 9 CLRCGISGnaTPHMRRGPDGPRTLCNACGIAYRKGKM 45 5667777777************************876 PP
2	FAR1	83.8	2.8e-26	79	166	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA +vGFsvrks+s+ks++n ++ rtfvCs+eg+++++k+ +++++r tr+gC a+l +k + + k++vt+++ eHnH+lap TRIDC2BG025410.2 79 EFYNKYAGHVGFSVRKSTSHKSSENI-TKVRTFVCSREGYNRDKKSL--EAKKPRLDTRIGCPARLIIKVTPECKYRVTDFKAEHNHQLAP 166 6*******************6666.899*********9988..99***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
DSLDGHVRCL RCGISGNATP HMRRGPDGPR TLCNACGIAY RKGKMRRMIE AEPPIDEASL 60 AKLVPEVDME FESEEKAYEF YNKYAGHVGF SVRKSTSHKS SENITKVRTF VCSREGYNRD 120 KKSLEAKKPR LDTRIGCPAR LIIKVTPECK YRVTDFKAEH NHQLAPPSTM HMLRSQRILT 180 ELQSGEAELS DDSVVTPTTK ATGDLVVRQV GFLRSISVLP ADYKNYLRSK RTKAMQPGDG 240 GAILKYLQTM QMDNPSFFYT MQIDEDDKLT NFFWADPKSR EDFTYFNDVL CLDTTYKING 300 YGRPLALFLG VNHHRQTIIF GAAMLYDESF ESYKWLFESF KIAMHGKEPA VALIDQLIQL 360 SSAMAAAWPN TAQRVCAWHV YQNSVKHLNQ VFQGSKTFAK DFSKCVFGYE EEEEFVFAWR 420 TMLEKYDLRH NEWLSKLFDE RERWALAYDR HIFCADIISS LQAESFSSIL KKFLSPQLDL 480 LSFFKHYERA VDEHRYAELQ ADFQASQSYP RIPPAKMLKQ TSHMYTPVVF EIFRKEFELF 540 MDSVLFTCGE AGTTSDYKVA PSEKPKEHFV RFNSSDNSCM CTCKKFEFMG IPCCHMLKVL 600 DYRNIKELPH IYLLKRWRRT AKSTDEDSQG HAANDNRSSL NVSVPSANHH GLQSINARIQ 660 DTSLSNMHEN PFHRSS

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

DSLDGHVRCL RCGISGNATP HMRRGPDGPR TLCNACGIAY RKGKMRRMIE AEPPIDEASL  60
AKLVPEVDME FESEEKAYEF YNKYAGHVGF SVRKSTSHKS SENITKVRTF VCSREGYNRD  120
KKSLEAKKPR LDTRIGCPAR LIIKVTPECK YRVTDFKAEH NHQLAPPSTM HMLRSQRILT  180
ELQSGEAELS DDSVVTPTTK ATGDLVVRQV GFLRSISVLP ADYKNYLRSK RTKAMQPGDG  240
GAILKYLQTM QMDNPSFFYT MQIDEDDKLT NFFWADPKSR EDFTYFNDVL CLDTTYKING  300
YGRPLALFLG VNHHRQTIIF GAAMLYDESF ESYKWLFESF KIAMHGKEPA VALIDQLIQL  360
SSAMAAAWPN TAQRVCAWHV YQNSVKHLNQ VFQGSKTFAK DFSKCVFGYE EEEEFVFAWR  420
TMLEKYDLRH NEWLSKLFDE RERWALAYDR HIFCADIISS LQAESFSSIL KKFLSPQLDL  480
LSFFKHYERA VDEHRYAELQ ADFQASQSYP RIPPAKMLKQ TSHMYTPVVF EIFRKEFELF  540
MDSVLFTCGE AGTTSDYKVA PSEKPKEHFV RFNSSDNSCM CTCKKFEFMG IPCCHMLKVL  600
DYRNIKELPH IYLLKRWRRT AKSTDEDSQG HAANDNRSSL NVSVPSANHH GLQSINARIQ  660
DTSLSNMHEN PFHRSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-118	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG025410.2