PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG025410.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 768aa MW: 87467.6 Da PI: 7.8904

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG025410.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	43.2	5.6e-14	105	141	1	35
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C Cg + Tp++Rrgpdg++tLCnaCG+ yrk ++ TRIDC2BG025410.1 105 CLRCGISGnaTPHMRRGPDGPRTLCNACGIAYRKGKM 141 5667777777************************876 PP
2	FAR1	83.6	3.3e-26	175	262	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA +vGFsvrks+s+ks++n ++ rtfvCs+eg+++++k+ +++++r tr+gC a+l +k + + k++vt+++ eHnH+lap TRIDC2BG025410.1 175 EFYNKYAGHVGFSVRKSTSHKSSENI-TKVRTFVCSREGYNRDKKSL--EAKKPRLDTRIGCPARLIIKVTPECKYRVTDFKAEHNHQLAP 262 6*******************6666.899*********9988..99***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 768 aa Download sequence
HEATYRAAAS DPSTPSPIPT PLICLAPNPS SDSHKPRGFP KFVRNFLPNH SPVLPKGGDA 60 MMHMLVASDG GGGEMHPYAA VPAEQELELH RDNAADDSLD GHVRCLRCGI SGNATPHMRR 120 GPDGPRTLCN ACGIAYRKGK MRRMIEAEPP IDEASLAKLV PEVDMEFESE EKAYEFYNKY 180 AGHVGFSVRK STSHKSSENI TKVRTFVCSR EGYNRDKKSL EAKKPRLDTR IGCPARLIIK 240 VTPECKYRVT DFKAEHNHQL APPSTMHMLR SQRILTELQS GEAELSDDSV VTPTTKATGD 300 LVVRQVGFLR SISVLPADYK NYLRSKRTKA MQPGDGGAIL KYLQTMQMDN PSFFYTMQID 360 EDDKLTNFFW ADPKSREDFT YFNDVLCLDT TYKINGYGRP LALFLGVNHH RQTIIFGAAM 420 LYDESFESYK WLFESFKIAM HGKEPAVALI DQLIQLSSAM AAAWPNTAQR VCAWHVYQNS 480 VKHLNQVFQG SKTFAKDFSK CVFGYEEEEE FVFAWRTMLE KYDLRHNEWL SKLFDERERW 540 ALAYDRHIFC ADIISSLQAE SFSSILKKFL SPQLDLLSFF KHYERAVDEH RYAELQADFQ 600 ASQSYPRIPP AKMLKQTSHM YTPVVFEIFR KEFELFMDSV LFTCGEAGTT SDYKVAPSEK 660 PKEHFVRFNS SDNSCMCTCK KFEFMGIPCC HMLKVLDYRN IKELPHIYLL KRWRRTAKST 720 DEDSQGHAAN DNRSSLNVSV PSANHHGLQS INARIQVINS QLTFLCGK

Sequence ? help Back to Top

Protein Sequence Length: 768 aa Download sequence

HEATYRAAAS DPSTPSPIPT PLICLAPNPS SDSHKPRGFP KFVRNFLPNH SPVLPKGGDA  60
MMHMLVASDG GGGEMHPYAA VPAEQELELH RDNAADDSLD GHVRCLRCGI SGNATPHMRR  120
GPDGPRTLCN ACGIAYRKGK MRRMIEAEPP IDEASLAKLV PEVDMEFESE EKAYEFYNKY  180
AGHVGFSVRK STSHKSSENI TKVRTFVCSR EGYNRDKKSL EAKKPRLDTR IGCPARLIIK  240
VTPECKYRVT DFKAEHNHQL APPSTMHMLR SQRILTELQS GEAELSDDSV VTPTTKATGD  300
LVVRQVGFLR SISVLPADYK NYLRSKRTKA MQPGDGGAIL KYLQTMQMDN PSFFYTMQID  360
EDDKLTNFFW ADPKSREDFT YFNDVLCLDT TYKINGYGRP LALFLGVNHH RQTIIFGAAM  420
LYDESFESYK WLFESFKIAM HGKEPAVALI DQLIQLSSAM AAAWPNTAQR VCAWHVYQNS  480
VKHLNQVFQG SKTFAKDFSK CVFGYEEEEE FVFAWRTMLE KYDLRHNEWL SKLFDERERW  540
ALAYDRHIFC ADIISSLQAE SFSSILKKFL SPQLDLLSFF KHYERAVDEH RYAELQADFQ  600
ASQSYPRIPP AKMLKQTSHM YTPVVFEIFR KEFELFMDSV LFTCGEAGTT SDYKVAPSEK  660
PKEHFVRFNS SDNSCMCTCK KFEFMGIPCC HMLKVLDYRN IKELPHIYLL KRWRRTAKST  720
DEDSQGHAAN DNRSSLNVSV PSANHHGLQS INARIQVINS QLTFLCGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-117	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG025410.1