PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG023880.17

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 625aa MW: 67545.8 Da PI: 4.4446

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG023880.17	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.5	3.2e-13	9	52	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W+ eEd ll +a k+lG++ W+ Ia+ + gRt++ +k+r+ + TRIDC2BG023880.17 9 KGGWSREEDMLLCEAQKLLGNK-WTEIAKVVS-GRTDNAVKNRFST 52 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 625 aa Download sequence
NYLNTECKKG GWSREEDMLL CEAQKLLGNK WTEIAKVVSG RTDNAVKNRF STLCKRRAKD 60 DELLEENGTV CSNASAKRVL TQSGGVTCAA PGSSPPIKNM SSCKPDFKEN LAPNMRSFGQ 120 QKSIRQDSRQ PLASICPDNQ SVNIVKTQSL VTKTSTKQLH GEEQSCVKHD GNFLKRNDPK 180 LATLLQQADL LSSLATKVNT ENTSQSMDEA WQKLQHHLVK KDDNDMSESS MSGTASLLDD 240 LDDLIVDPYE NEEEDEQKSR EQNGATSQVA PDQIMDNCPV DQIAEESSLC GNTLSSTMEP 300 CPVAEILAHI NLGEAAEDMG LHFMEYSSPT HAAQAQQAKA DAEIPASVDL SESAEVQAQQ 360 AKADAEIPVS VDLSEAAEGS WSQFMEYTSP AHTVLHAEGD AETPASVKLS EAAEGSWSQF 420 MEYMSPAHIV LHAKADAETP ASVNLGEAAE GSLPQCMEPM SPAHTLLRAK TDYEIPASAN 480 LSEAAKDDSL QCTEYTSPAR ADLQANADAE ISEDFSEVAQ DSRLQCAKFT SPAHTAIKGK 540 AVAKKGTSEN CSDVPEDSST QPCMEFTSPA HTVPTFHPFT DNVPTPKITA SERNFLLSVL 600 ELASPGSKPE TSQQPSCKRA LLNSL

Sequence ? help Back to Top

Protein Sequence Length: 625 aa Download sequence

NYLNTECKKG GWSREEDMLL CEAQKLLGNK WTEIAKVVSG RTDNAVKNRF STLCKRRAKD  60
DELLEENGTV CSNASAKRVL TQSGGVTCAA PGSSPPIKNM SSCKPDFKEN LAPNMRSFGQ  120
QKSIRQDSRQ PLASICPDNQ SVNIVKTQSL VTKTSTKQLH GEEQSCVKHD GNFLKRNDPK  180
LATLLQQADL LSSLATKVNT ENTSQSMDEA WQKLQHHLVK KDDNDMSESS MSGTASLLDD  240
LDDLIVDPYE NEEEDEQKSR EQNGATSQVA PDQIMDNCPV DQIAEESSLC GNTLSSTMEP  300
CPVAEILAHI NLGEAAEDMG LHFMEYSSPT HAAQAQQAKA DAEIPASVDL SESAEVQAQQ  360
AKADAEIPVS VDLSEAAEGS WSQFMEYTSP AHTVLHAEGD AETPASVKLS EAAEGSWSQF  420
MEYMSPAHIV LHAKADAETP ASVNLGEAAE GSLPQCMEPM SPAHTLLRAK TDYEIPASAN  480
LSEAAKDDSL QCTEYTSPAR ADLQANADAE ISEDFSEVAQ DSRLQCAKFT SPAHTAIKGK  540
AVAKKGTSEN CSDVPEDSST QPCMEFTSPA HTVPTFHPFT DNVPTPKITA SERNFLLSVL  600
ELASPGSKPE TSQQPSCKRA LLNSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	1e-42	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG023880.17